STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
NIDE3702Putative Inorganic phosphate transporter; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative transporter. (398 aa)    
Predicted Functional Partners:
NIDE0855
Conserved protein of unknown function, DUF47; Homologs of previously reported genes of unknown function.
 
  
 0.953
pstA
Phosphate ABC transporter, auxiliary and permease protein (modular protein); Function of strongly homologous gene; transporter.
     
 0.856
NIDE3701
Homologs of previously reported genes of unknown function.
       0.773
phoB
Phosphate regulon transcriptional regulator PhoB; Function of strongly homologous gene; regulator.
      
 0.738
NIDE3903
Alpha-glucan phosphorylase; Function of strongly homologous gene; enzyme.
     
 0.734
phoU
Phosphate transport system protein PhoU; Plays a role in the regulation of phosphate uptake.
     
 0.703
glgA
Glycogen synthase; Synthesizes alpha-1,4-glucan chains using ADP-glucose.
   
  
 0.669
speE
Putative Spermidine synthase modulated with MFS-type transporter; Catalyzes the irreversible transfer of a propylamine group from the amino donor S-adenosylmethioninamine (decarboxy-AdoMet) to putrescine (1,4-diaminobutane) to yield spermidine.
   
  
 0.669
NIDE3700
Putative Transcriptional regulator, ArsR family; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative regulator.
     
 0.639
NIDE3709
Putative Arsenite S-adenosylmethyltransferase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.
      
 0.631
Your Current Organism:
Nitrospira defluvii
NCBI taxonomy Id: 330214
Other names: Candidatus Nitrospira defluvii, LMG 27402, LMG:27402, N. defluvii, NCIMB 14950, strain A17
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.