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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NIDE3709Putative Arsenite S-adenosylmethyltransferase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme. (274 aa)    
Predicted Functional Partners:
NIDE3701
Homologs of previously reported genes of unknown function.
 
     0.891
arsR
Arsenical resistance operon repressor; Function of homologous gene experimentally demonstrated in an other organism; regulator.
     
 0.856
arsC
Arsenate reductase; Function of homologous gene experimentally demonstrated in an other organism; enzyme; Belongs to the low molecular weight phosphotyrosine protein phosphatase family.
    
 0.735
NIDE3702
Putative Inorganic phosphate transporter; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative transporter.
      
 0.691
NIDE3791
Protein of unknown function, putative Methyltransferase; No homology to any previously reported sequences.
 
   
 0.637
NIDE2794
Methyltransferase, ubiE family; Function of strongly homologous gene; enzyme.
  
     0.611
NIDE3708
Putative Arsenite resistance protein ArsB; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative transporter.
     
 0.587
hflK
FtsH protease activity modulator HflK; HflC and HflK could encode or regulate a protease.
       0.431
hflC
FtsH protease activity modulator HflC; HflC and HflK could regulate a protease.
       0.431
Your Current Organism:
Nitrospira defluvii
NCBI taxonomy Id: 330214
Other names: Candidatus Nitrospira defluvii, LMG 27402, LMG:27402, N. defluvii, NCIMB 14950, strain A17
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