Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
NIDE3762Transposase; Function of strongly homologous gene; extrachromosomal origin. (234 aa)    
Predicted Functional Partners:
NIDE2134
Transposase, IS3/IS911 family; Function of strongly homologous gene; extrachromosomal origin.
     0.779
NIDE2706
Transposase (fragment); Function of strongly homologous gene; enzyme.
  
     0.775
NIDE0912
Transposase, IS3 family; Function of strongly homologous gene; enzyme.
     0.754
NIDE2713
Transposase, IS3/IS911 family; Function of strongly homologous gene; extrachromosomal origin.
  
     0.617
NIDE3763
Transposase (N-terminal fragment); Function of strongly homologous gene; extrachromosomal origin.
 
     0.582
NIDE3760
Homologs of previously reported genes of unknown function.
       0.443
NIDE3761
Putative Acetyltransferase, contains PIN domain; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.
       0.443
Your Current Organism:
Nitrospira defluvii
NCBI taxonomy Id: 330214
Other names: Candidatus Nitrospira defluvii, LMG 27402, LMG:27402, N. defluvii, NCIMB 14950, strain A17
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