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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NIDE3785Putative Universal stress protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative factor. (326 aa)    
Predicted Functional Partners:
NIDE3786
Putative Calcium-transporting ATPase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative transporter.
  
  
 0.827
NIDE3787
Conserved protein of unknown function, contains CBS domain pairs; Homologs of previously reported genes of unknown function; 15326606, 9020585.
  
    0.533
NIDE3784
Homologs of previously reported genes of unknown function.
       0.470
NIDE3783
Conserved protein of unknown function, contains CBS domain pair; Homologs of previously reported genes of unknown function; 15326606, 9020585.
       0.410
cspB
Cold shock protein modulated with ribosomal subunit interface-like protein; Function of strongly homologous gene; factor.
   
  
 0.406
Your Current Organism:
Nitrospira defluvii
NCBI taxonomy Id: 330214
Other names: Candidatus Nitrospira defluvii, LMG 27402, LMG:27402, N. defluvii, NCIMB 14950, strain A17
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.