STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Coexpression
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[Homology]
Score
NIDE3786Putative Calcium-transporting ATPase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative transporter. (932 aa)    
Predicted Functional Partners:
NIDE3785
Putative Universal stress protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative factor.
  
  
 0.826
NIDE3958
Homologs of previously reported genes of unknown function.
   
    0.573
NIDE3787
Conserved protein of unknown function, contains CBS domain pairs; Homologs of previously reported genes of unknown function; 15326606, 9020585.
  
    0.543
NIDE1185
Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.
  
 0.485
NIDE4168
Putative Glutathione-regulated potassium-efflux system; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative transporter; Belongs to the monovalent cation:proton antiporter 2 (CPA2) transporter (TC 2.A.37) family.
  
 
 0.473
NIDE3784
Homologs of previously reported genes of unknown function.
       0.470
NIDE0600
Putative Membrane-associated zinc metallopeptidase containing CBS domain pair; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme; Belongs to the peptidase M50B family.
 
    0.458
NIDE3783
Conserved protein of unknown function, contains CBS domain pair; Homologs of previously reported genes of unknown function; 15326606, 9020585.
       0.421
NIDE2720
Protein of unknown function; No homology to any previously reported sequences; 16894158.
   
 
 0.417
NIDE0008
Conserved membrane protein of unknown function, DoxX family; Homologs of previously reported genes of unknown function.
   
  0.411
Your Current Organism:
Nitrospira defluvii
NCBI taxonomy Id: 330214
Other names: Candidatus Nitrospira defluvii, LMG 27402, LMG:27402, N. defluvii, NCIMB 14950, strain A17
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.