| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| NIDE3822 | rnc | NIDE3822 | NIDE0800 | Putative Kinase inhibitor YbhB; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative factor. | Ribonuclease III; Digests double-stranded RNA. Involved in the processing of primary rRNA transcript to yield the immediate precursors to the large and small rRNAs (23S and 16S). Processes some mRNAs, and tRNAs when they are encoded in the rRNA operon. Processes pre-crRNA and tracrRNA of type II CRISPR loci if present in the organism. | 0.770 |
| NIDE3822 | rplB | NIDE3822 | NIDE1314 | Putative Kinase inhibitor YbhB; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative factor. | 50S ribosomal protein L2; One of the primary rRNA binding proteins. Required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation. It has been suggested to have peptidyltransferase activity; this is somewhat controversial. Makes several contacts with the 16S rRNA in the 70S ribosome. Belongs to the universal ribosomal protein uL2 family. | 0.788 |
| NIDE3822 | rplC | NIDE3822 | NIDE1311 | Putative Kinase inhibitor YbhB; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative factor. | 50S ribosomal protein L3; One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit; Belongs to the universal ribosomal protein uL3 family. | 0.771 |
| NIDE3822 | rplO | NIDE3822 | NIDE1330 | Putative Kinase inhibitor YbhB; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative factor. | 50S ribosomal protein L15; Binds to the 23S rRNA; Belongs to the universal ribosomal protein uL15 family. | 0.786 |
| NIDE3822 | rplQ | NIDE3822 | NIDE1340 | Putative Kinase inhibitor YbhB; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative factor. | 50S ribosomal protein L17; Function of homologous gene experimentally demonstrated in an other organism; structure. | 0.778 |
| NIDE3822 | rplS | NIDE3822 | NIDE3070 | Putative Kinase inhibitor YbhB; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative factor. | 50S ribosomal protein L19; This protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site. | 0.793 |
| NIDE3822 | rpmA | NIDE3822 | NIDE1101 | Putative Kinase inhibitor YbhB; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative factor. | 50S ribosomal protein L27; Function of homologous gene experimentally demonstrated in an other organism; structure; Belongs to the bacterial ribosomal protein bL27 family. | 0.788 |
| NIDE3822 | rpsB | NIDE3822 | NIDE2757 | Putative Kinase inhibitor YbhB; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative factor. | 30S ribosomal protein S2; Function of homologous gene experimentally demonstrated in an other organism; structure; Belongs to the universal ribosomal protein uS2 family. | 0.786 |
| NIDE3822 | rpsE | NIDE3822 | NIDE1328 | Putative Kinase inhibitor YbhB; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative factor. | 30S ribosomal protein S5; Located at the back of the 30S subunit body where it stabilizes the conformation of the head with respect to the body. Belongs to the universal ribosomal protein uS5 family. | 0.787 |
| NIDE3822 | rpsJ | NIDE3822 | NIDE1310 | Putative Kinase inhibitor YbhB; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative factor. | 30S ribosomal protein S10; Involved in the binding of tRNA to the ribosomes. Belongs to the universal ribosomal protein uS10 family. | 0.780 |
| rnc | NIDE3822 | NIDE0800 | NIDE3822 | Ribonuclease III; Digests double-stranded RNA. Involved in the processing of primary rRNA transcript to yield the immediate precursors to the large and small rRNAs (23S and 16S). Processes some mRNAs, and tRNAs when they are encoded in the rRNA operon. Processes pre-crRNA and tracrRNA of type II CRISPR loci if present in the organism. | Putative Kinase inhibitor YbhB; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative factor. | 0.770 |
| rnc | rplB | NIDE0800 | NIDE1314 | Ribonuclease III; Digests double-stranded RNA. Involved in the processing of primary rRNA transcript to yield the immediate precursors to the large and small rRNAs (23S and 16S). Processes some mRNAs, and tRNAs when they are encoded in the rRNA operon. Processes pre-crRNA and tracrRNA of type II CRISPR loci if present in the organism. | 50S ribosomal protein L2; One of the primary rRNA binding proteins. Required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation. It has been suggested to have peptidyltransferase activity; this is somewhat controversial. Makes several contacts with the 16S rRNA in the 70S ribosome. Belongs to the universal ribosomal protein uL2 family. | 0.864 |
| rnc | rplC | NIDE0800 | NIDE1311 | Ribonuclease III; Digests double-stranded RNA. Involved in the processing of primary rRNA transcript to yield the immediate precursors to the large and small rRNAs (23S and 16S). Processes some mRNAs, and tRNAs when they are encoded in the rRNA operon. Processes pre-crRNA and tracrRNA of type II CRISPR loci if present in the organism. | 50S ribosomal protein L3; One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit; Belongs to the universal ribosomal protein uL3 family. | 0.868 |
| rnc | rplO | NIDE0800 | NIDE1330 | Ribonuclease III; Digests double-stranded RNA. Involved in the processing of primary rRNA transcript to yield the immediate precursors to the large and small rRNAs (23S and 16S). Processes some mRNAs, and tRNAs when they are encoded in the rRNA operon. Processes pre-crRNA and tracrRNA of type II CRISPR loci if present in the organism. | 50S ribosomal protein L15; Binds to the 23S rRNA; Belongs to the universal ribosomal protein uL15 family. | 0.884 |
| rnc | rplQ | NIDE0800 | NIDE1340 | Ribonuclease III; Digests double-stranded RNA. Involved in the processing of primary rRNA transcript to yield the immediate precursors to the large and small rRNAs (23S and 16S). Processes some mRNAs, and tRNAs when they are encoded in the rRNA operon. Processes pre-crRNA and tracrRNA of type II CRISPR loci if present in the organism. | 50S ribosomal protein L17; Function of homologous gene experimentally demonstrated in an other organism; structure. | 0.891 |
| rnc | rplS | NIDE0800 | NIDE3070 | Ribonuclease III; Digests double-stranded RNA. Involved in the processing of primary rRNA transcript to yield the immediate precursors to the large and small rRNAs (23S and 16S). Processes some mRNAs, and tRNAs when they are encoded in the rRNA operon. Processes pre-crRNA and tracrRNA of type II CRISPR loci if present in the organism. | 50S ribosomal protein L19; This protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site. | 0.915 |
| rnc | rpmA | NIDE0800 | NIDE1101 | Ribonuclease III; Digests double-stranded RNA. Involved in the processing of primary rRNA transcript to yield the immediate precursors to the large and small rRNAs (23S and 16S). Processes some mRNAs, and tRNAs when they are encoded in the rRNA operon. Processes pre-crRNA and tracrRNA of type II CRISPR loci if present in the organism. | 50S ribosomal protein L27; Function of homologous gene experimentally demonstrated in an other organism; structure; Belongs to the bacterial ribosomal protein bL27 family. | 0.889 |
| rnc | rpsB | NIDE0800 | NIDE2757 | Ribonuclease III; Digests double-stranded RNA. Involved in the processing of primary rRNA transcript to yield the immediate precursors to the large and small rRNAs (23S and 16S). Processes some mRNAs, and tRNAs when they are encoded in the rRNA operon. Processes pre-crRNA and tracrRNA of type II CRISPR loci if present in the organism. | 30S ribosomal protein S2; Function of homologous gene experimentally demonstrated in an other organism; structure; Belongs to the universal ribosomal protein uS2 family. | 0.883 |
| rnc | rpsE | NIDE0800 | NIDE1328 | Ribonuclease III; Digests double-stranded RNA. Involved in the processing of primary rRNA transcript to yield the immediate precursors to the large and small rRNAs (23S and 16S). Processes some mRNAs, and tRNAs when they are encoded in the rRNA operon. Processes pre-crRNA and tracrRNA of type II CRISPR loci if present in the organism. | 30S ribosomal protein S5; Located at the back of the 30S subunit body where it stabilizes the conformation of the head with respect to the body. Belongs to the universal ribosomal protein uS5 family. | 0.860 |
| rnc | rpsJ | NIDE0800 | NIDE1310 | Ribonuclease III; Digests double-stranded RNA. Involved in the processing of primary rRNA transcript to yield the immediate precursors to the large and small rRNAs (23S and 16S). Processes some mRNAs, and tRNAs when they are encoded in the rRNA operon. Processes pre-crRNA and tracrRNA of type II CRISPR loci if present in the organism. | 30S ribosomal protein S10; Involved in the binding of tRNA to the ribosomes. Belongs to the universal ribosomal protein uS10 family. | 0.843 |
