STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NIDE3864Putative Cytochrome c553 precursor; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative carrier. (120 aa)    
Predicted Functional Partners:
qcrB
Quinol-cytochrome c reductase, fused cytochrome b/c subunit; Function of strongly homologous gene; carrier.
  
 
 0.972
NIDE3882
Putative Multihaem cytochrome c; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative carrier.
 
 
 
 0.812
NIDE0905
Protein of unknown function, putative Cytochrome c; No homology to any previously reported sequences; 3881803.
 
 
 0.802
NIDE3893
Putative Cytochrome c553; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative carrier.
 
  
 0.756
NIDE0903
Conserved protein of unknown function, putative Cytochrome c; Homologs of previously reported genes of unknown function; 3881803.
  
     0.717
NIDE0818
Conserved exported protein of unknown function, putative diheme cytochrome c; Homologs of previously reported genes of unknown function.
  
     0.714
NIDE3865
Conserved membrane protein of unknown function, contains Thioredoxin-like region; Homologs of previously reported genes of unknown function; 2181145, 2668278, 3152490, 3286320.
       0.714
NIDE3863
Putative Universal stress protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative factor.
       0.705
NIDE3293
Putative Cytochrome c (modular protein); Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative carrier.
  
     0.704
NIDE3866
Putative Acyl-CoA synthetase (NDP forming); Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.
  
    0.704
Your Current Organism:
Nitrospira defluvii
NCBI taxonomy Id: 330214
Other names: Candidatus Nitrospira defluvii, LMG 27402, LMG:27402, N. defluvii, NCIMB 14950, strain A17
Server load: low (14%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.