STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NIDE3871Conserved protein of unknown function, contains Haemerythrin-like metal-binding domains; Homologs of previously reported genes of unknown function; 16553864, 17289666, 18203837, 18357473, 2016748, 3856224. (160 aa)    
Predicted Functional Partners:
NIDE3872
Conserved exported protein of unknown function, contains Cytochrome c' and Ankyrin repeats; Homologs of previously reported genes of unknown function; 8108379.
      0.899
cheM
Globin-coupled methyl-accepting chemotaxis protein (modular protein); Function of strongly homologous gene; regulator.
  
  
 0.893
NIDE3870
Exported protein of unknown function, putative Diheme cytochrome c; No homology to any previously reported sequences.
       0.773
vorB
2-ketoisovalerate ferredoxin reductase, beta subunit; Function of strongly homologous gene; enzyme.
  
    0.746
nxrB1
Putative Nitrate oxidoreductase, beta subunit; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.
 
     0.609
nxrB2
Putative Nitrate oxidoreductase, beta subunit; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.
 
     0.609
NIDE3876
Homologs of previously reported genes of unknown function.
       0.571
nxrA2
Putative Nitrate oxidoreductase, alpha subunit; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family.
  
     0.552
nxrA1
Putative Nitrate oxidoreductase, alpha subunit; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family.
  
     0.540
NIDE3869
Homologs of previously reported genes of unknown function.
       0.536
Your Current Organism:
Nitrospira defluvii
NCBI taxonomy Id: 330214
Other names: Candidatus Nitrospira defluvii, LMG 27402, LMG:27402, N. defluvii, NCIMB 14950, strain A17
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.