Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
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Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
NIDE3886Putative Quinol-cytochrome c reductase, cytochrome c subunit; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative carrier. (291 aa)    
Predicted Functional Partners:
NIDE3220
Putative 3-mercaptopyruvate sulfurtransferase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.
  
 
 0.908
NIDE3884
Putative Sulfite:cytochrome c oxidoreductase, subunit A; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.
 
 
 
 0.709
NIDE3883
Putative Sulfite:cytochrome c oxidoreductase, subunit B; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative carrier.
   
 
 0.632
NIDE3882
Putative Multihaem cytochrome c; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative carrier.
   
 
 0.576
ccpA
Cytochrome c551 peroxidase; Function of homologous gene experimentally demonstrated in an other organism; enzyme.
 
  
 0.553
NIDE3885
Conserved protein of unknown function, OsmC-like; Homologs of previously reported genes of unknown function; 15054099, 15103136, 15111059, 1715407, 8820643, 9573147.
       0.532
qcrB
Quinol-cytochrome c reductase, fused cytochrome b/c subunit; Function of strongly homologous gene; carrier.
  
  
 0.482
NIDE3888
Putative Cytochrome c55X; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative carrier.
  
  
 0.414
NIDE3887
Homologs of previously reported genes of unknown function.
       0.410
Your Current Organism:
Nitrospira defluvii
NCBI taxonomy Id: 330214
Other names: Candidatus Nitrospira defluvii, LMG 27402, LMG:27402, N. defluvii, NCIMB 14950, strain A17
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