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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NIDE3893Putative Cytochrome c553; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative carrier. (121 aa)    
Predicted Functional Partners:
qcrB
Quinol-cytochrome c reductase, fused cytochrome b/c subunit; Function of strongly homologous gene; carrier.
  
 
 0.865
NIDE0905
Protein of unknown function, putative Cytochrome c; No homology to any previously reported sequences; 3881803.
 
 
 0.849
NIDE3882
Putative Multihaem cytochrome c; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative carrier.
 
  
 0.831
NIDE3894
Protein of unknown function; No homology to any previously reported sequences.
       0.773
NIDE3864
Putative Cytochrome c553 precursor; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative carrier.
 
  
 0.756
NIDE3892
Conserved exported protein of unknown function, putative Cytochrome c; Homologs of previously reported genes of unknown function.
       0.714
NIDE3350
Conserved exported protein of unknown function, putative Cytochrome c; Homologs of previously reported genes of unknown function; 12594933, 16924113, 3881803.
 
  
 0.652
NIDE4057
Putative Cytochrome c; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative factor.
 
  
 0.652
NIDE3879
Putative Cytochrome c (modular protein); Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative carrier.
 
     0.630
NIDE0818
Conserved exported protein of unknown function, putative diheme cytochrome c; Homologs of previously reported genes of unknown function.
 
  
 0.561
Your Current Organism:
Nitrospira defluvii
NCBI taxonomy Id: 330214
Other names: Candidatus Nitrospira defluvii, LMG 27402, LMG:27402, N. defluvii, NCIMB 14950, strain A17
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.