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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NIDE3920Conserved membrane protein of unknown function DUF81; Homologs of previously reported genes of unknown function. (267 aa)    
Predicted Functional Partners:
NIDE3919
Exported protein of unknown function; No homology to any previously reported sequences.
       0.773
NIDE3921
Homologs of previously reported genes of unknown function.
       0.623
NIDE3918
Homologs of previously reported genes of unknown function.
  
  
 0.514
NIDE3922
Exported protein of unknown function; No homology to any previously reported sequences.
       0.496
NIDE3917
RND-type efflux transporter, membrane-fusion protein; Function of strongly homologous gene; transporter; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
       0.469
sqr
Sulfide:quinone oxidoreductase; Function of strongly homologous gene; enzyme.
 
     0.428
guaA
GMP synthase (glutamine-hydrolyzing); Catalyzes the synthesis of GMP from XMP.
  
  
 0.421
Your Current Organism:
Nitrospira defluvii
NCBI taxonomy Id: 330214
Other names: Candidatus Nitrospira defluvii, LMG 27402, LMG:27402, N. defluvii, NCIMB 14950, strain A17
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