STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
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Cooccurrence
Coexpression
Experiments
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[Homology]
Score
NIDE4010Putative Phage integrase (modular protein); Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; extrachromosomal origin; Belongs to the 'phage' integrase family. (410 aa)    
Predicted Functional Partners:
NIDE4006
Putative Phage terminase, small subunit; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; extrachromosomal origin.
 
     0.794
NIDE4007
Putative Phage tail length tape measure protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; extrachromosomal origin.
  
    0.777
NIDE4008
Protein of unknown function; No homology to any previously reported sequences.
       0.773
NIDE4009
Putative Excisionase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; extrachromosomal origin.
       0.773
NIDE2145
Protein of unknown function; No homology to any previously reported sequences; 14687564, 15973401.
  
     0.764
NIDE4005
Protein of unknown function; No homology to any previously reported sequences.
       0.762
NIDE2279
Putative Phage integrase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; extrachromosomal origin; Belongs to the 'phage' integrase family.
  
     0.697
NIDE4233
Putative Phage integrase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; extrachromosomal origin; Belongs to the 'phage' integrase family.
  
     0.680
NIDE4004
Protein of unknown function; Doubtful CDS.
       0.564
NIDE1089
Putative Phosphoribosyltransferase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.
   
    0.476
Your Current Organism:
Nitrospira defluvii
NCBI taxonomy Id: 330214
Other names: Candidatus Nitrospira defluvii, LMG 27402, LMG:27402, N. defluvii, NCIMB 14950, strain A17
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.