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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NIDE4084Putative Protein TolB (fragment); Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative transporter. (377 aa)    
Predicted Functional Partners:
NIDE3190
Putative Peptidase, M28 family; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.
     0.913
NIDE4085
Putative Peptidase M; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.
 
     0.866
NIDE4083
Membrane protein of unknown function, putative Phosphoesterase; No homology to any previously reported sequences; 17079146, 9041652, 9260289.
       0.812
NIDE4086
Putative Response regulator, CheY-like; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative regulator.
       0.744
NIDE3566
Putative Peptidase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.
     0.713
ftsY
Cell division protein ftsY homolog; Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Acts as a receptor for the complex formed by the signal recognition particle (SRP) and the ribosome-nascent chain (RNC).
     
 0.583
NIDE3727
Putative Soluble lytic murein transglycosylase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.
  
  
 0.558
NIDE0994
Homologs of previously reported genes of unknown function.
 
 
 
 0.549
NIDE1028
Homologs of previously reported genes of unknown function.
 
 
 
 0.535
NIDE3365
Putative Extracellular ligand-binding receptor; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative receptor.
  
  
 0.532
Your Current Organism:
Nitrospira defluvii
NCBI taxonomy Id: 330214
Other names: Candidatus Nitrospira defluvii, LMG 27402, LMG:27402, N. defluvii, NCIMB 14950, strain A17
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.