NIDE4100 protein (Nitrospira defluvii) - STRING interaction network

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second shell of interactors

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proteins of unknown 3D structure

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Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

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textmining

co-expression

protein homology

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[Homology]

Score

NIDE4100

Protein of unknown function; No homology to any previously reported sequences. (175 aa)

Predicted Functional Partners:

NIDE4097

0.839

NIDE4101

0.826

NIDE4099

0.816

pilC

0.790

gspF

0.790

pilD

0.755

gspE2

0.735

gspE

0.735

NIDE0685

0.714

gspG

0.714

Your Current Organism:

Nitrospira defluvii

NCBI taxonomy Id: 330214
Other names: Candidatus Nitrospira defluvii, LMG 27402, LMG:27402, N. defluvii, NCIMB 14950, strain A17

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
NIDE0685	NIDE4097	NIDE0685	NIDE4097	Putative General secretion pathway protein G (modular Protein); Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative transporter.	Putative Type IV pilus assembly protein PilB; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative structure.	0.665
NIDE0685	NIDE4100	NIDE0685	NIDE4100	Putative General secretion pathway protein G (modular Protein); Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative transporter.	Protein of unknown function; No homology to any previously reported sequences.	0.714
NIDE0685	gspE	NIDE0685	NIDE2825	Putative General secretion pathway protein G (modular Protein); Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative transporter.	General secretion pathway protein E; Function of strongly homologous gene; transporter.	0.672
NIDE0685	gspE2	NIDE0685	NIDE1508	Putative General secretion pathway protein G (modular Protein); Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative transporter.	General secretion pathway protein E, contains GAF domain; Function of strongly homologous gene; transporter.	0.649
NIDE0685	gspF	NIDE0685	NIDE2826	Putative General secretion pathway protein G (modular Protein); Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative transporter.	General secretion pathway protein F; Function of strongly homologous gene; transporter.	0.702
NIDE0685	gspG	NIDE0685	NIDE2817	Putative General secretion pathway protein G (modular Protein); Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative transporter.	General secretion pathway protein G; Function of homologous gene experimentally demonstrated in an other organism; transporter.	0.975
NIDE0685	pilC	NIDE0685	NIDE0777	Putative General secretion pathway protein G (modular Protein); Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative transporter.	Type IV pilus biogenesis protein PilC; Function of strongly homologous gene; transporter.	0.689
NIDE0685	pilD	NIDE0685	NIDE4102	Putative General secretion pathway protein G (modular Protein); Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative transporter.	Type IV pilus prepilin peptidase PilD; Cleaves type-4 fimbrial leader sequence and methylates the N- terminal (generally Phe) residue.	0.540
NIDE4097	NIDE0685	NIDE4097	NIDE0685	Putative Type IV pilus assembly protein PilB; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative structure.	Putative General secretion pathway protein G (modular Protein); Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative transporter.	0.665
NIDE4097	NIDE4099	NIDE4097	NIDE4099	Putative Type IV pilus assembly protein PilB; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative structure.	Exported protein of unknown function; No homology to any previously reported sequences.	0.501
NIDE4097	NIDE4100	NIDE4097	NIDE4100	Putative Type IV pilus assembly protein PilB; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative structure.	Protein of unknown function; No homology to any previously reported sequences.	0.839
NIDE4097	NIDE4101	NIDE4097	NIDE4101	Putative Type IV pilus assembly protein PilB; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative structure.	Conserved protein of unknown function, putative Fimbrial protein PilA; Homologs of previously reported genes of unknown function.	0.497
NIDE4097	gspF	NIDE4097	NIDE2826	Putative Type IV pilus assembly protein PilB; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative structure.	General secretion pathway protein F; Function of strongly homologous gene; transporter.	0.953
NIDE4097	gspG	NIDE4097	NIDE2817	Putative Type IV pilus assembly protein PilB; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative structure.	General secretion pathway protein G; Function of homologous gene experimentally demonstrated in an other organism; transporter.	0.751
NIDE4097	pilC	NIDE4097	NIDE0777	Putative Type IV pilus assembly protein PilB; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative structure.	Type IV pilus biogenesis protein PilC; Function of strongly homologous gene; transporter.	0.953
NIDE4097	pilD	NIDE4097	NIDE4102	Putative Type IV pilus assembly protein PilB; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative structure.	Type IV pilus prepilin peptidase PilD; Cleaves type-4 fimbrial leader sequence and methylates the N- terminal (generally Phe) residue.	0.889
NIDE4099	NIDE4097	NIDE4099	NIDE4097	Exported protein of unknown function; No homology to any previously reported sequences.	Putative Type IV pilus assembly protein PilB; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative structure.	0.501
NIDE4099	NIDE4100	NIDE4099	NIDE4100	Exported protein of unknown function; No homology to any previously reported sequences.	Protein of unknown function; No homology to any previously reported sequences.	0.816
NIDE4099	NIDE4101	NIDE4099	NIDE4101	Exported protein of unknown function; No homology to any previously reported sequences.	Conserved protein of unknown function, putative Fimbrial protein PilA; Homologs of previously reported genes of unknown function.	0.880
NIDE4099	pilD	NIDE4099	NIDE4102	Exported protein of unknown function; No homology to any previously reported sequences.	Type IV pilus prepilin peptidase PilD; Cleaves type-4 fimbrial leader sequence and methylates the N- terminal (generally Phe) residue.	0.530