close STRING v12.5 is now available!
The next version of STRING is ready for use in your analyses: updated networks across STRING • newly available directed regulatory networks • a new typed view showing functional, physical, and regulatory edges in one network • new clustering options and cluster-based layouts • … and much more!
Explore STRING v12.5 →
STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NIDE4150Conserved protein of unknown function, contains HEAT-like repeats; Homologs of previously reported genes of unknown function; 8132596, 9023176, 9882677. (456 aa)    
Predicted Functional Partners:
NIDE4151
Exported protein of unknown function; No homology to any previously reported sequences.
       0.826
NIDE4152
Homologs of previously reported genes of unknown function.
       0.826
NIDE1653
Protein of unknown function, contains PBS lyase HEAT-like repeats; No homology to any previously reported sequences; 16819590, 8132596, 9023176, 9882677.
  
     0.762
NIDE4149
Conserved protein of unknown function, Bilin biosynthesis protein-like; Homologs of previously reported genes of unknown function; 16819590, 8132596, 9023176, 9882677.
 
    
0.562
NIDE4148
Conserved protein of unknown function, contains HEAT-like repeats; Homologs of previously reported genes of unknown function; 7550332, 8132596, 8425055, 9023176, 9882677.
 
    
0.557
NIDE2640
Protein of unknown function, TPR-like; No homology to any previously reported sequences; 15189147, 1882418, 7667876, 7748903, 8690703, 9482716.
  
     0.556
NIDE4154
Exported protein of unknown function; No homology to any previously reported sequences.
       0.518
NIDE4153
Protein of unknown function; No homology to any previously reported sequences.
       0.515
NIDE4146
Protein of unknown function, contains HEAT-like repeat; No homology to any previously reported sequences; 9882677.
 
    
0.512
NIDE4147
Conserved protein of unknown function, Bilin biosynthesis protein-like; Homologs of previously reported genes of unknown function; 16819590, 7550332, 8132596, 8855320, 902317, 9023176, 9882677.
 
    
0.484
Your Current Organism:
Nitrospira defluvii
NCBI taxonomy Id: 330214
Other names: Candidatus Nitrospira defluvii, LMG 27402, LMG:27402, N. defluvii, NCIMB 14950, strain A17
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.