STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
NIDE4356Protein of unknown function, putative Lytic transglycosylase; No homology to any previously reported sequences; 14625683, 1938883, 8203016, 8692991. (205 aa)    
Predicted Functional Partners:
NIDE4357
Exported protein of unknown function; No homology to any previously reported sequences.
       0.648
NIDE0265
Putative Outer membrane protein, OmpA/MotB family; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative membrane component.
 
    0.489
NIDE0237
Exported protein of unknown function; No homology to any previously reported sequences; 16475801, 2202726.
 
    0.473
NIDE4355
Putative Aminotransferase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.
       0.470
motB
Flagellar motor protein MotB; Function of homologous gene experimentally demonstrated in an other organism; structure.
 
    0.442
NIDE0266
Putative Outer membrane protein, OmpA/MotB family; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative membrane component.
 
    0.440
NIDE4358
Membrane protein of unknown function; No homology to any previously reported sequences.
       0.409
yccU
Conserved protein of unknown function, CoA binding protein; Homologs of previously reported genes of unknown function.
       0.409
msrA-2
Peptide methionine sulfoxide reductase MsrA; Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine.
       0.409
NIDE3445
Putative Lytic murein transglycosylase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.
  
  
 0.403
Your Current Organism:
Nitrospira defluvii
NCBI taxonomy Id: 330214
Other names: Candidatus Nitrospira defluvii, LMG 27402, LMG:27402, N. defluvii, NCIMB 14950, strain A17
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.