STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KWZ79206.1SH3 domain protein; KEGG: ddi:DDB_G0274493 6.0e-05 lig1; DNA ligase I; K10747 DNA ligase 1. (357 aa)    
Predicted Functional Partners:
KWZ79207.1
Hypothetical protein; Psort location: CytoplasmicMembrane, score: 10.00.
       0.762
KWZ79208.1
Hypothetical protein.
       0.762
engB
Ribosome biogenesis GTP-binding protein YsxC; Necessary for normal cell division and for the maintenance of normal septation; Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. EngB GTPase family.
   
    0.756
KWZ79209.1
Hypothetical protein; Psort location: CytoplasmicMembrane, score: 8.78.
       0.731
KWZ78122.1
Serine-type D-Ala-D-Ala carboxypeptidase; KEGG: bsr:I33_2202 1.9e-24 YokZ; Psort location: Cytoplasmic, score: 9.89.
    
 0.495
KWZ79205.1
Cupin domain protein; KEGG: abu:Abu_2168 1.2e-08 hypothetical protein K11312; Psort location: Cytoplasmic, score: 7.50.
       0.480
Your Current Organism:
Anaerococcus tetradius
NCBI taxonomy Id: 33036
Other names: A. tetradius, ATCC 35098, CCM 3634, CCUG 17637, CCUG 46590, CIP 103927, DSM 2951, GIFU 7672, GIFU:7672, Gaffkya anaerobius, LMG 14264, LMG:14264, Peptostreptococcus tetradius, Tetracoccus anaerobius
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