STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KWZ78814.1Tetratricopeptide repeat protein; KEGG: bmq:BMQ_1471 5.9e-05 peptidase, C39 family (TPR domain); Psort location: Cytoplasmic, score: 7.50. (365 aa)    
Predicted Functional Partners:
ribBA
GTP cyclohydrolase II; Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate; In the C-terminal section; belongs to the GTP cyclohydrolase II family.
    
  0.867
argS
arginine--tRNA ligase; KEGG: apr:Apre_1335 7.5e-259 arginyl-tRNA synthetase K01887; Psort location: Cytoplasmic, score: 9.67.
 
     0.813
pheT
KEGG: apr:Apre_1339 0. phenylalanyl-tRNA synthetase subunit beta K01890; Psort location: Cytoplasmic, score: 9.97.
       0.779
mutS2
MutS2 family protein; Endonuclease that is involved in the suppression of homologous recombination and may therefore have a key role in the control of bacterial genetic diversity; Belongs to the DNA mismatch repair MutS family. MutS2 subfamily.
       0.779
KWZ78813.1
Hypothetical protein; Psort location: CytoplasmicMembrane, score: 10.00.
       0.776
KWZ78290.1
DnaD domain protein; Psort location: Cytoplasmic, score: 7.50.
  
     0.771
KWZ78810.1
Peptidase, U32 family; KEGG: apr:Apre_1337 6.5e-276 peptidase U32; K08303 putative protease; Psort location: Cytoplasmic, score: 7.50.
       0.766
KWZ78809.1
Cell division protein ZapA; Activator of cell division through the inhibition of FtsZ GTPase activity, therefore promoting FtsZ assembly into bundles of protofilaments necessary for the formation of the division Z ring. It is recruited early at mid-cell but it is not essential for cell division.
       0.762
KWZ75771.1
Penicillin-binding protein, transpeptidase domain protein; KEGG: tmt:Tmath_0876 5.7e-92 penicillin-binding protein 2 K05515; Psort location: CytoplasmicMembrane, score: 9.99.
  
     0.721
polA
DNA-directed DNA polymerase; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity.
  
  
 0.687
Your Current Organism:
Anaerococcus tetradius
NCBI taxonomy Id: 33036
Other names: A. tetradius, ATCC 35098, CCM 3634, CCUG 17637, CCUG 46590, CIP 103927, DSM 2951, GIFU 7672, GIFU:7672, Gaffkya anaerobius, LMG 14264, LMG:14264, Peptostreptococcus tetradius, Tetracoccus anaerobius
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