STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KWZ78560.1KEGG: shn:Shewana3_3300 1.1e-13 chromate transporter K07240; Psort location: CytoplasmicMembrane, score: 10.00. (199 aa)    
Predicted Functional Partners:
KWZ78559.1
KEGG: apb:SAR116_1094 4.4e-14 chromate transporter K07240; Psort location: CytoplasmicMembrane, score: 10.00.
 
   
0.876
KWZ78561.1
KEGG: gni:GNIT_2106 6.4e-05 aldose 1-epimerase; K01792 glucose-6-phosphate 1-epimerase; Psort location: Cytoplasmic, score: 7.50.
       0.620
KWZ78861.1
KEGG: apb:SAR116_1094 1.5e-13 chromate transporter K07240; Psort location: CytoplasmicMembrane, score: 10.00.
 
   
0.479
KWZ78391.1
KEGG: apb:SAR116_1094 2.1e-09 chromate transporter K07240; Psort location: CytoplasmicMembrane, score: 10.00.
 
   
0.468
KWZ78562.1
Anaerobic sulfatase maturase; KEGG: efu:HMPREF0351_12971 5.8e-62 arylsulfatase regulator, anaerobic sulfatase-maturating enzyme K06871; Psort location: Cytoplasmic, score: 9.67.
       0.440
Your Current Organism:
Anaerococcus tetradius
NCBI taxonomy Id: 33036
Other names: A. tetradius, ATCC 35098, CCM 3634, CCUG 17637, CCUG 46590, CIP 103927, DSM 2951, GIFU 7672, GIFU:7672, Gaffkya anaerobius, LMG 14264, LMG:14264, Peptostreptococcus tetradius, Tetracoccus anaerobius
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