STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KWZ78579.1MATE efflux family protein; KEGG: ssr:SALIVB_2015 1.5e-31 queuine tRNA-ribosyltransferase; Psort location: CytoplasmicMembrane, score: 10.00. (446 aa)    
Predicted Functional Partners:
KWZ78578.1
Hypothetical protein; KEGG: apr:Apre_0428 7.2e-103 pyridoxal/pyridoxine/pyridoxamine kinase-like protein; K00868 pyridoxine kinase.
       0.746
ispH
4-hydroxy-3-methylbut-2-enyl diphosphate reductase; Catalyzes the conversion of 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate (HMBPP) into a mixture of isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP). Acts in the terminal step of the DOXP/MEP pathway for isoprenoid precursor biosynthesis. Belongs to the IspH family.
 
  
 0.576
KWZ77744.1
KEGG: rlt:Rleg2_4805 2.5e-35 MATE efflux family protein; Psort location: CytoplasmicMembrane, score: 10.00.
  
   
 0.530
KWZ78577.1
KEGG: apr:Apre_0429 1.0e-245 phospholipase D/Transphosphatidylase; K06131 cardiolipin synthase; Psort location: CytoplasmicMembrane, score: 10.00.
       0.527
KWZ78941.1
KEGG: apr:Apre_0765 3.8e-168 glyceraldehyde-3-phosphate dehydrogenase, type I K00134; Psort location: Cytoplasmic, score: 9.97.
   
  
 0.465
Your Current Organism:
Anaerococcus tetradius
NCBI taxonomy Id: 33036
Other names: A. tetradius, ATCC 35098, CCM 3634, CCUG 17637, CCUG 46590, CIP 103927, DSM 2951, GIFU 7672, GIFU:7672, Gaffkya anaerobius, LMG 14264, LMG:14264, Peptostreptococcus tetradius, Tetracoccus anaerobius
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