STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KWZ78625.1Putative ATP synthase F0, A subunit; KEGG: pfe:PSF113_1419 2.0e-11 yfgO; protein YfgO K03548; Psort location: CytoplasmicMembrane, score: 10.00. (402 aa)    
Predicted Functional Partners:
KWZ78621.1
Metal cation transporter, ZIP family; KEGG: smm:Smp_146170 3.7e-36 DNA polymerase epsilon catalytic subunit; K02324 DNA polymerase epsilon subunit 1; Psort location: CytoplasmicMembrane, score: 10.00.
  
    0.778
KWZ78624.1
Hypothetical protein; Psort location: Cytoplasmic, score: 7.50.
       0.777
KWZ78622.1
Phosphorylase, glycogen/starch/alpha-glucan family; Phosphorylase is an important allosteric enzyme in carbohydrate metabolism. Enzymes from different sources differ in their regulatory mechanisms and in their natural substrates. However, all known phosphorylases share catalytic and structural properties.
       0.773
KWZ78623.1
4-alpha-glucanotransferase; KEGG: apr:Apre_0413 1.6e-249 4-alpha-glucanotransferase K00705; Psort location: Cytoplasmic, score: 9.97.
       0.773
KWZ78626.1
KEGG: apr:Apre_0410 9.1e-80 thiamine pyrophosphokinase; K00949 thiamine pyrophosphokinase; Psort location: Cytoplasmic, score: 7.50.
       0.547
KWZ78620.1
Nuclease-like protein; KEGG: fno:Fnod_0753 2.6e-34 nuclease; K01174 micrococcal nuclease; Psort location: Extracellular, score: 10.00.
  
    0.454
KWZ79011.1
KEGG: apr:Apre_1105 7.4e-62 phosphoribosylaminoimidazole carboxylase catalytic subunit K01588; Psort location: Cytoplasmic, score: 7.50.
    
  0.420
Your Current Organism:
Anaerococcus tetradius
NCBI taxonomy Id: 33036
Other names: A. tetradius, ATCC 35098, CCM 3634, CCUG 17637, CCUG 46590, CIP 103927, DSM 2951, GIFU 7672, GIFU:7672, Gaffkya anaerobius, LMG 14264, LMG:14264, Peptostreptococcus tetradius, Tetracoccus anaerobius
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