STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KWZ78635.1TRAP transporter solute receptor, DctP family; KEGG: cnc:CNE_2c21430 4.1e-29 dhaT; 1,3-propanediol dehydrogenase DhaT. (353 aa)    
Predicted Functional Partners:
KWZ78634.1
TRAP transporter, DctQ-like membrane protein; KEGG: apb:SAR116_0248 4.3e-06 C4-dicarboxylate transport system, permease small protein; Psort location: CytoplasmicMembrane, score: 10.00.
 
  
 0.973
KWZ78633.1
TRAP transporter, DctM subunit; KEGG: apb:SAR116_0249 1.1e-51 TRAP dicarboxylate transporter subunit DctM; Psort location: CytoplasmicMembrane, score: 10.00.
  
 0.959
KWZ78864.1
TRAP transporter, DctQ-like membrane protein; KEGG: pmy:Pmen_2569 3.5e-13 carbohydrate kinase K00851; Psort location: CytoplasmicMembrane, score: 10.00.
 
  
 0.887
KWZ78863.1
TRAP transporter, DctM subunit; KEGG: apb:SAR116_0249 4.9e-65 TRAP dicarboxylate transporter subunit DctM; Psort location: CytoplasmicMembrane, score: 10.00.
  
 0.828
KWZ78636.1
KEGG: cpy:Cphy_2742 9.6e-37 LacI family transcriptional regulator K03487; Psort location: Cytoplasmic, score: 9.97.
       0.777
KWZ78632.1
Kinase, PfkB family; KEGG: apr:Apre_1598 1.7e-76 PfkB domain-containing protein; K00874 2-dehydro-3-deoxygluconokinase; Psort location: Cytoplasmic, score: 7.50.
     
 0.669
KWZ78637.1
KEGG: apr:Apre_1385 3.9e-127 8-oxoguanine DNA glycosylase; K03660 N-glycosylase/DNA lyase; Psort location: Cytoplasmic, score: 7.50.
       0.435
KWZ78638.1
Sortase, SrtB family; KEGG: apr:Apre_1386 4.2e-114 sortase; K08600 sortase B; Psort location: Cytoplasmic, score: 7.50.
       0.435
Your Current Organism:
Anaerococcus tetradius
NCBI taxonomy Id: 33036
Other names: A. tetradius, ATCC 35098, CCM 3634, CCUG 17637, CCUG 46590, CIP 103927, DSM 2951, GIFU 7672, GIFU:7672, Gaffkya anaerobius, LMG 14264, LMG:14264, Peptostreptococcus tetradius, Tetracoccus anaerobius
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