STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KWZ78093.1Sortase B cell surface sorting signal; KEGG: tca:660419 4.4e-05 similar to CG4879-PB, isoform B; K10902 ATP-dependent DNA helicase Q5. (383 aa)    
Predicted Functional Partners:
KWZ78094.1
Hypothetical protein; Psort location: CytoplasmicMembrane, score: 9.55.
       0.557
KWZ79235.1
Hypothetical protein; KEGG: saj:SaurJH9_2430 2.0e-09 ribulose-phosphate 3-epimerase K01783.
   
  
 0.495
KWZ78095.1
Hypothetical protein; KEGG: efu:HMPREF0351_11193 2.5e-54 dihydrodipicolinate synthase/N-acetylneuraminate lyase; Psort location: Cytoplasmic, score: 7.50.
       0.447
KWZ78096.1
KEGG: rde:RD1_0100 4.8e-42 T4 family peptidase; K01266 D-aminopeptidase.
       0.447
purD
KEGG: apr:Apre_1107 0. phosphoribosylformylglycinamidine synthase K01952; Psort location: Cytoplasmic, score: 9.67; Belongs to the GARS family.
     
 0.428
Your Current Organism:
Anaerococcus tetradius
NCBI taxonomy Id: 33036
Other names: A. tetradius, ATCC 35098, CCM 3634, CCUG 17637, CCUG 46590, CIP 103927, DSM 2951, GIFU 7672, GIFU:7672, Gaffkya anaerobius, LMG 14264, LMG:14264, Peptostreptococcus tetradius, Tetracoccus anaerobius
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