STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KWZ78151.1Putative ATP-dependent nuclease subunit B; ATP-dependent DNA helicase. (1120 aa)    
Predicted Functional Partners:
KWZ78152.1
Putative ATP-dependent nuclease subunit A; ATP-dependent DNA helicase.
 
 
 0.999
sbcD
Exonuclease SbcCD, D subunit; SbcCD cleaves DNA hairpin structures. These structures can inhibit DNA replication and are intermediates in certain DNA recombination reactions. The complex acts as a 3'->5' double strand exonuclease that can open hairpins. It also has a 5' single-strand endonuclease activity; Belongs to the SbcD family.
 
  
 0.886
KWZ78150.1
KEGG: ctc:CTC00579 3.6e-101 sbcC; exonuclease SbcC K03546; Psort location: Cellwall, score: 8.97.
 
  
 0.869
KWZ78148.1
Hypothetical protein; Psort location: CytoplasmicMembrane, score: 9.55; Belongs to the UPF0246 family.
       0.773
KWZ78153.1
Hypothetical protein.
       0.773
KWZ77491.1
Hypothetical protein; Psort location: Cytoplasmic, score: 7.50; Belongs to the UPF0297 family.
  
     0.520
KWZ78971.1
KEGG: apr:Apre_1134 2.8e-85 hypothetical protein; K06967 tRNA (adenine22-N1)-methyltransferase; Psort location: Cytoplasmic, score: 7.50.
 
     0.483
KWZ78147.1
Hypothetical protein; Psort location: Cytoplasmic, score: 7.50.
       0.477
KWZ77732.1
six-Cys-in-45 modification radical SAM protein; KEGG: mcj:MCON_2732 1.2e-17 anaerobic sulfatase-maturating protein K06871; Psort location: Cytoplasmic, score: 7.50.
  
     0.428
KWZ77477.1
Aluminum resistance protein; KEGG: bqy:MUS_1917 2.8e-94 ynbB; cystathionine gamma-lyase; Psort location: Cytoplasmic, score: 7.50.
  
     0.424
Your Current Organism:
Anaerococcus tetradius
NCBI taxonomy Id: 33036
Other names: A. tetradius, ATCC 35098, CCM 3634, CCUG 17637, CCUG 46590, CIP 103927, DSM 2951, GIFU 7672, GIFU:7672, Gaffkya anaerobius, LMG 14264, LMG:14264, Peptostreptococcus tetradius, Tetracoccus anaerobius
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.