STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KWZ78054.1SH3 domain protein; KEGG: cbj:H04402_02164 0.00014 multimodular transpeptidase-transglycosylase; Psort location: CytoplasmicMembrane, score: 9.55. (139 aa)    
Predicted Functional Partners:
KWZ78051.1
Chain length determinant protein; KEGG: cth:Cthe_1363 7.6e-28 lipopolysaccharide biosynthesis protein K08252.
       0.773
KWZ78052.1
KEGG: apr:Apre_0541 3.8e-97 capsular polysaccharide biosynthesis protein; Psort location: CytoplasmicMembrane, score: 9.51.
       0.773
KWZ78053.1
PHP domain protein; KEGG: apr:Apre_0542 1.6e-107 protein-tyrosine-phosphatase K01104; Psort location: Cytoplasmic, score: 7.50.
       0.773
KWZ78050.1
Hypothetical protein.
       0.401
Your Current Organism:
Anaerococcus tetradius
NCBI taxonomy Id: 33036
Other names: A. tetradius, ATCC 35098, CCM 3634, CCUG 17637, CCUG 46590, CIP 103927, DSM 2951, GIFU 7672, GIFU:7672, Gaffkya anaerobius, LMG 14264, LMG:14264, Peptostreptococcus tetradius, Tetracoccus anaerobius
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