STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KWZ77488.1Transcriptional regulator, Fur family; KEGG: mct:MCR_0333 1.4e-17 fur; ferric uptake regulation protein Fur K03711; Psort location: Cytoplasmic, score: 9.97; Belongs to the Fur family. (145 aa)    
Predicted Functional Partners:
KWZ77491.1
Hypothetical protein; Psort location: Cytoplasmic, score: 7.50; Belongs to the UPF0297 family.
  
    0.814
KWZ77493.1
Putative HTH-type transcriptional regulator CymR; KEGG: hdn:Hden_2359 6.8e-15 Rrf2 family transcriptional regulator K04487; Psort location: Cytoplasmic, score: 7.50.
     
 0.810
rnj
Hypothetical protein; An RNase that has 5'-3' exonuclease and possibly endonuclease activity. Involved in maturation of rRNA and in some organisms also mRNA maturation and/or decay.
       0.809
KWZ77490.1
RNAse H domain protein, YqgF family; Could be a nuclease involved in processing of the 5'-end of pre-16S rRNA; Belongs to the YqgF HJR family.
       0.809
KWZ77486.1
O-methyltransferase; KEGG: ctc:CTC01062 1.6e-43 caffeoyl-CoA O-methyltransferase K00588; Psort location: Cytoplasmic, score: 7.50.
       0.808
KWZ77485.1
Peptidase, U32 family; KEGG: apr:Apre_0943 6.7e-203 peptidase U32; K08303 putative protease; Psort location: Cytoplasmic, score: 7.50.
       0.806
KWZ77489.1
Hypothetical protein; Psort location: Cytoplasmic, score: 7.50.
  
    0.802
alaS
alanine--tRNA ligase; Catalyzes the attachment of alanine to tRNA(Ala) in a two- step reaction: alanine is first activated by ATP to form Ala-AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain.
  
    0.798
KWZ77494.1
comEA protein; KEGG: has:Halsa_0780 6.7e-07 glycogen/starch synthase K00703; Psort location: CytoplasmicMembrane, score: 9.51.
       0.763
KWZ78521.1
Transcriptional regulator, Fur family; KEGG: rsa:RSal33209_0845 1.8e-08 catalase K03781; Psort location: Cytoplasmic, score: 7.50; Belongs to the Fur family.
  
     0.742
Your Current Organism:
Anaerococcus tetradius
NCBI taxonomy Id: 33036
Other names: A. tetradius, ATCC 35098, CCM 3634, CCUG 17637, CCUG 46590, CIP 103927, DSM 2951, GIFU 7672, GIFU:7672, Gaffkya anaerobius, LMG 14264, LMG:14264, Peptostreptococcus tetradius, Tetracoccus anaerobius
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