STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KWZ77537.1Radical SAM protein family; KEGG: fnu:FN1142 9.4e-46 oxygen-independent coproporphyrinogen III oxidase K07139; Psort location: Cytoplasmic, score: 7.50. (323 aa)    
Predicted Functional Partners:
KWZ77536.1
Hypothetical protein; Psort location: Cytoplasmic, score: 7.50.
       0.805
KWZ77538.1
Hypothetical protein; KEGG: cni:Calni_0723 0.0093 n-acetylneuraminate synthase K15898; Psort location: Cytoplasmic, score: 7.50.
       0.773
KWZ77540.1
PPIC-type PPIASE domain protein; KEGG: apr:Apre_0887 3.2e-100 PpiC-type peptidyl-prolyl cis-trans isomerase; K03769 peptidyl-prolyl cis-trans isomerase C; Psort location: CytoplasmicMembrane, score: 9.51.
       0.731
KWZ77539.1
Hypothetical protein; KEGG: bhy:BHWA1_00520 3.1e-16 pepD; aminoacyl-histidine dipeptidase; K01270 dipeptidase D; Psort location: Cytoplasmic, score: 7.50.
       0.727
KWZ77541.1
Hypothetical protein; KEGG: mai:MICA_2002 3.5e-23 3-deoxy-7-phosphoheptulonate synthase K00243; Psort location: Cytoplasmic, score: 7.50; Belongs to the CvfB family.
       0.727
KWZ77534.1
Pseudouridine synthase, RluA family; Responsible for synthesis of pseudouridine from uracil. Belongs to the pseudouridine synthase RluA family.
  
    0.674
KWZ77535.1
Hypothetical protein; KEGG: pfa:PFD0565c 0.00090 DEAD box ATP-dependent RNA helicase, putative; K01509 adenosinetriphosphatase.
       0.671
KWZ77532.1
Putative alkaline phosphatase synthesis transcriptional regulatory protein PhoP; KEGG: ava:Ava_1878 4.1e-45 two component transcriptional regulator K11329; Psort location: Cytoplasmic, score: 9.97.
  
    0.669
KWZ77530.1
Hypothetical protein; KEGG: tpi:TREPR_3623 2.0e-05 DNA polymerase III PolC-type (PolIII) K02342.
       0.668
KWZ77531.1
ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein; KEGG: cby:CLM_0421 2.8e-92 sensor histidine kinase; Psort location: CytoplasmicMembrane, score: 9.51.
       0.668
Your Current Organism:
Anaerococcus tetradius
NCBI taxonomy Id: 33036
Other names: A. tetradius, ATCC 35098, CCM 3634, CCUG 17637, CCUG 46590, CIP 103927, DSM 2951, GIFU 7672, GIFU:7672, Gaffkya anaerobius, LMG 14264, LMG:14264, Peptostreptococcus tetradius, Tetracoccus anaerobius
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