STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KWZ77454.1Site-specific recombinase, phage integrase family; KEGG: bqy:MUS_1239 1.2e-31 ATP synthase C chain (lipid-binding protein)(dicyclohexylcarbodiimide-binding protein); Psort location: Cytoplasmic, score: 7.50; Belongs to the 'phage' integrase family. (353 aa)    
Predicted Functional Partners:
KWZ77679.1
KEGG: apr:Apre_1042 0. pyruvate ferredoxin/flavodoxin oxidoreductase; K03737 putative pyruvate-flavodoxin oxidoreductase; Psort location: Cytoplasmic, score: 7.50.
    
  0.852
KWZ77698.1
KEGG: apr:Apre_1042 0. pyruvate ferredoxin/flavodoxin oxidoreductase; K03737 putative pyruvate-flavodoxin oxidoreductase.
    
  0.850
KWZ77453.1
Hypothetical protein.
 
     0.580
KWZ78947.1
comF family protein; KEGG: fth:FTH_0402 3.7e-12 amidophosphoribosyltransferase K00764.
   
    0.491
whiA
Hypothetical protein; Involved in cell division and chromosome segregation.
   
    0.445
xpt
Xanthine phosphoribosyltransferase; Converts the preformed base xanthine, a product of nucleic acid breakdown, to xanthosine 5'-monophosphate (XMP), so it can be reused for RNA or DNA synthesis.
   
    0.435
apt
Adenine phosphoribosyltransferase; Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis.
   
    0.435
KWZ77450.1
Toxin-antitoxin system, toxin component domain protein; Psort location: Cytoplasmic, score: 7.50.
  
  
 0.434
KWZ77448.1
DNA-binding helix-turn-helix protein; KEGG: mla:Mlab_1603 8.9e-07 adenine deaminase K01486; Psort location: Cytoplasmic, score: 7.50.
  
  
 0.411
KWZ77452.1
Hypothetical protein; KEGG: clu:CLUG_01495 5.6e-09 similar to 2-oxoglutarate dehydrogenase complex E2 component; K00658 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase).
       0.403
Your Current Organism:
Anaerococcus tetradius
NCBI taxonomy Id: 33036
Other names: A. tetradius, ATCC 35098, CCM 3634, CCUG 17637, CCUG 46590, CIP 103927, DSM 2951, GIFU 7672, GIFU:7672, Gaffkya anaerobius, LMG 14264, LMG:14264, Peptostreptococcus tetradius, Tetracoccus anaerobius
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