STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KWZ77090.1Putative type-I restriction enzyme; KEGG: pgt:PGTDC60_1964 1.1e-262 type I restriction-modification system subunit R; K01153 type I restriction enzyme, R subunit; Psort location: Cytoplasmic, score: 7.50. (781 aa)    
Predicted Functional Partners:
KWZ77746.1
DEAD2 domain protein; KEGG: amt:Amet_4220 3.1e-173 DEAD/DEAH box helicase; K10844 DNA excision repair protein ERCC-2; Psort location: Cytoplasmic, score: 7.50.
   
 0.997
polA
DNA-directed DNA polymerase; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity.
  
 0.997
rpoA
DNA-directed RNA polymerase, alpha subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
    
  0.996
rpoB
DNA-directed RNA polymerase, beta subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
   
 0.996
rpoZ
DNA-directed RNA polymerase, omega subunit; Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits.
    
  0.996
rpoC
DNA-directed RNA polymerase, beta' subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
   
 0.967
KWZ77089.1
N-6 DNA Methylase; KEGG: tsu:Tresu_0585 1.5e-187 N-6 DNA methylase; K03427 type I restriction enzyme M protein.
 
   
 0.959
KWZ78502.1
Histidine triad domain protein; KEGG: cbj:H04402_03042 2.4e-31 bis(5'-nucleosyl)-tetraphosphatase; Psort location: Cytoplasmic, score: 7.50.
  
 
  0.953
KWZ77088.1
KEGG: mpe:MYPE8200 2.1e-73 type I restriction-modification system S subunit; K01154 type I restriction enzyme, S subunit; Psort location: Cytoplasmic, score: 7.50.
 
  
 0.953
KWZ79196.1
DNA polymerase III, beta subunit; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for initiation of [...]
    
  0.850
Your Current Organism:
Anaerococcus tetradius
NCBI taxonomy Id: 33036
Other names: A. tetradius, ATCC 35098, CCM 3634, CCUG 17637, CCUG 46590, CIP 103927, DSM 2951, GIFU 7672, GIFU:7672, Gaffkya anaerobius, LMG 14264, LMG:14264, Peptostreptococcus tetradius, Tetracoccus anaerobius
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