STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KWZ76630.1Nodulation efficiency protein D; KEGG: bya:BANAU_2519 1.3e-15 yqeZ; membrane-bound serine protease K07403; Psort location: CytoplasmicMembrane, score: 10.00. (204 aa)    
Predicted Functional Partners:
KWZ76631.1
Hypothetical protein; Psort location: Cytoplasmic, score: 7.50.
 
  
 0.988
KWZ76632.1
Hypothetical protein; KEGG: ame:413805 5.3e-05 nucleolar protein at 60B ortholog; K11131 H/ACA ribonucleoprotein complex subunit 4.
       0.773
KWZ76633.1
PhoH-like protein; KEGG: ttu:TERTU_3875 1.9e-77 phosphate starvation-inducible protein PhoH family protein, ATPase K06217; Psort location: Cytoplasmic, score: 9.97.
       0.615
ybeY
Translation metalloprotein YbeY; Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA.
       0.611
era
Ribosome biogenesis GTPase Era; An essential GTPase that binds both GDP and GTP, with rapid nucleotide exchange. Plays a role in 16S rRNA processing and 30S ribosomal subunit biogenesis and possibly also in cell cycle regulation and energy metabolism.
       0.611
recO
DNA repair protein RecO; Involved in DNA repair and RecF pathway recombination.
       0.611
glyS
KEGG: apr:Apre_0335 0. glycyl-tRNA synthetase subunit beta K01879; Psort location: Cytoplasmic, score: 9.97.
       0.610
KWZ76635.1
Cytidine deaminase; This enzyme scavenges exogenous and endogenous cytidine and 2'-deoxycytidine for UMP synthesis; Belongs to the cytidine and deoxycytidylate deaminase family.
       0.606
glyQ
glycine--tRNA ligase, alpha subunit; KEGG: apr:Apre_0334 3.2e-155 glyQ; glycyl-tRNA synthetase subunit alpha K01878; Psort location: Cytoplasmic, score: 9.97.
       0.599
KWZ76640.1
Hypothetical protein; Bifunctional serine/threonine kinase and phosphorylase involved in the regulation of the pyruvate, phosphate dikinase (PPDK) by catalyzing its phosphorylation/dephosphorylation.
       0.588
Your Current Organism:
Anaerococcus tetradius
NCBI taxonomy Id: 33036
Other names: A. tetradius, ATCC 35098, CCM 3634, CCUG 17637, CCUG 46590, CIP 103927, DSM 2951, GIFU 7672, GIFU:7672, Gaffkya anaerobius, LMG 14264, LMG:14264, Peptostreptococcus tetradius, Tetracoccus anaerobius
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