Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
CDL23_01200 | CDL23_01205 | GCA_900067245_00147 | GCA_900067245_00146 | Unannotated protein. | Unannotated protein; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily. | 0.998 |
CDL23_01200 | CDL23_01210 | GCA_900067245_00147 | GCA_900067245_00145 | Unannotated protein. | Unannotated protein. | 0.998 |
CDL23_01200 | GCA_900067245_03112 | GCA_900067245_00147 | GCA_900067245_03112 | Unannotated protein. | Unannotated protein. | 0.514 |
CDL23_01200 | GCA_900067245_03114 | GCA_900067245_00147 | GCA_900067245_03114 | Unannotated protein. | Unannotated protein. | 0.454 |
CDL23_01200 | cbiT | GCA_900067245_00147 | GCA_900067245_03022 | Unannotated protein. | Unannotated protein. | 0.488 |
CDL23_01200 | cobA | GCA_900067245_00147 | GCA_900067245_03031 | Unannotated protein. | Unannotated protein. | 0.583 |
CDL23_01200 | cobS | GCA_900067245_00147 | GCA_900067245_03025 | Unannotated protein. | Unannotated protein; Joins adenosylcobinamide-GDP and alpha-ribazole to generate adenosylcobalamin (Ado-cobalamin). Also synthesizes adenosylcobalamin 5'-phosphate from adenosylcobinamide-GDP and alpha-ribazole 5'- phosphate; Belongs to the CobS family. | 0.483 |
CDL23_01200 | feoB-2 | GCA_900067245_00147 | GCA_900067245_01948 | Unannotated protein. | Unannotated protein; Probable transporter of a GTP-driven Fe(2+) uptake system. Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. FeoB GTPase (TC 9.A.8) family. | 0.468 |
CDL23_01200 | hisI | GCA_900067245_00147 | GCA_900067245_03755 | Unannotated protein. | Unannotated protein; In the C-terminal section; belongs to the PRA-PH family. | 0.456 |
CDL23_01200 | miaB | GCA_900067245_00147 | GCA_900067245_00144 | Unannotated protein. | Unannotated protein; Catalyzes the methylthiolation of N6-(dimethylallyl)adenosine (i(6)A), leading to the formation of 2-methylthio-N6- (dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine. | 0.490 |
CDL23_01205 | CDL23_01200 | GCA_900067245_00146 | GCA_900067245_00147 | Unannotated protein; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily. | Unannotated protein. | 0.998 |
CDL23_01205 | CDL23_01210 | GCA_900067245_00146 | GCA_900067245_00145 | Unannotated protein; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily. | Unannotated protein. | 0.999 |
CDL23_01205 | cbiT | GCA_900067245_00146 | GCA_900067245_03022 | Unannotated protein; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily. | Unannotated protein. | 0.435 |
CDL23_01205 | cobA | GCA_900067245_00146 | GCA_900067245_03031 | Unannotated protein; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily. | Unannotated protein. | 0.588 |
CDL23_01205 | cobS | GCA_900067245_00146 | GCA_900067245_03025 | Unannotated protein; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily. | Unannotated protein; Joins adenosylcobinamide-GDP and alpha-ribazole to generate adenosylcobalamin (Ado-cobalamin). Also synthesizes adenosylcobalamin 5'-phosphate from adenosylcobinamide-GDP and alpha-ribazole 5'- phosphate; Belongs to the CobS family. | 0.451 |
CDL23_01205 | feoB-2 | GCA_900067245_00146 | GCA_900067245_01948 | Unannotated protein; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily. | Unannotated protein; Probable transporter of a GTP-driven Fe(2+) uptake system. Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. FeoB GTPase (TC 9.A.8) family. | 0.474 |
CDL23_01205 | miaB | GCA_900067245_00146 | GCA_900067245_00144 | Unannotated protein; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily. | Unannotated protein; Catalyzes the methylthiolation of N6-(dimethylallyl)adenosine (i(6)A), leading to the formation of 2-methylthio-N6- (dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine. | 0.527 |
CDL23_01210 | CDL23_01200 | GCA_900067245_00145 | GCA_900067245_00147 | Unannotated protein. | Unannotated protein. | 0.998 |
CDL23_01210 | CDL23_01205 | GCA_900067245_00145 | GCA_900067245_00146 | Unannotated protein. | Unannotated protein; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily. | 0.999 |
CDL23_01210 | GCA_900067245_03112 | GCA_900067245_00145 | GCA_900067245_03112 | Unannotated protein. | Unannotated protein. | 0.408 |
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