Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
CDL25_00305 | CDL25_00310 | GCA_900067245_00277 | GCA_900067245_00278 | Unannotated protein. | Unannotated protein. | 0.517 |
CDL25_00305 | folD | GCA_900067245_00277 | GCA_900067245_00280 | Unannotated protein. | Unannotated protein; Catalyzes the oxidation of 5,10-methylenetetrahydrofolate to 5,10-methenyltetrahydrofolate and then the hydrolysis of 5,10- methenyltetrahydrofolate to 10-formyltetrahydrofolate. | 0.495 |
CDL25_00305 | gltA | GCA_900067245_00277 | GCA_900067245_00276 | Unannotated protein. | Unannotated protein. | 0.998 |
CDL25_00305 | nifJ | GCA_900067245_00277 | GCA_900067245_02897 | Unannotated protein. | Unannotated protein. | 0.745 |
CDL25_00310 | CDL25_00305 | GCA_900067245_00278 | GCA_900067245_00277 | Unannotated protein. | Unannotated protein. | 0.517 |
CDL25_00310 | CDL27_04025 | GCA_900067245_00278 | GCA_900067245_02126 | Unannotated protein. | Unannotated protein; Belongs to the aldehyde dehydrogenase family. | 0.523 |
CDL25_00310 | CDL27_04765 | GCA_900067245_00278 | GCA_900067245_00282 | Unannotated protein. | Unannotated protein. | 0.443 |
CDL25_00310 | CDL27_04780 | GCA_900067245_00278 | GCA_900067245_00279 | Unannotated protein. | Unannotated protein. | 0.452 |
CDL25_00310 | CDL27_08385 | GCA_900067245_00278 | GCA_900067245_01141 | Unannotated protein. | Unannotated protein. | 0.966 |
CDL25_00310 | fhs | GCA_900067245_00278 | GCA_900067245_00281 | Unannotated protein. | Unannotated protein; Belongs to the formate--tetrahydrofolate ligase family. | 0.484 |
CDL25_00310 | folD | GCA_900067245_00278 | GCA_900067245_00280 | Unannotated protein. | Unannotated protein; Catalyzes the oxidation of 5,10-methylenetetrahydrofolate to 5,10-methenyltetrahydrofolate and then the hydrolysis of 5,10- methenyltetrahydrofolate to 10-formyltetrahydrofolate. | 0.484 |
CDL25_00310 | glgA | GCA_900067245_00278 | GCA_900067245_03468 | Unannotated protein. | Unannotated protein; Synthesizes alpha-1,4-glucan chains using ADP-glucose. | 0.481 |
CDL25_00310 | gltA | GCA_900067245_00278 | GCA_900067245_00276 | Unannotated protein. | Unannotated protein. | 0.484 |
CDL25_00310 | nifJ | GCA_900067245_00278 | GCA_900067245_02897 | Unannotated protein. | Unannotated protein. | 0.723 |
CDL27_04025 | CDL25_00310 | GCA_900067245_02126 | GCA_900067245_00278 | Unannotated protein; Belongs to the aldehyde dehydrogenase family. | Unannotated protein. | 0.523 |
CDL27_04025 | CDL27_08385 | GCA_900067245_02126 | GCA_900067245_01141 | Unannotated protein; Belongs to the aldehyde dehydrogenase family. | Unannotated protein. | 0.805 |
CDL27_04025 | gltA | GCA_900067245_02126 | GCA_900067245_00276 | Unannotated protein; Belongs to the aldehyde dehydrogenase family. | Unannotated protein. | 0.818 |
CDL27_04025 | nifJ | GCA_900067245_02126 | GCA_900067245_02897 | Unannotated protein; Belongs to the aldehyde dehydrogenase family. | Unannotated protein. | 0.757 |
CDL27_04765 | CDL25_00310 | GCA_900067245_00282 | GCA_900067245_00278 | Unannotated protein. | Unannotated protein. | 0.443 |
CDL27_04765 | CDL27_04780 | GCA_900067245_00282 | GCA_900067245_00279 | Unannotated protein. | Unannotated protein. | 0.726 |
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