Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
CDL18_04590 | CDL27_04635 | GCA_900067245_02204 | GCA_900067245_00312 | Unannotated protein. | Unannotated protein. | 0.645 |
CDL20_12620 | CDL24_03850 | GCA_900067245_02169 | GCA_900067245_01887 | Unannotated protein; Belongs to the ABC transporter superfamily. | Unannotated protein; Belongs to the ABC transporter superfamily. | 0.902 |
CDL20_12620 | CDL24_03875 | GCA_900067245_02169 | GCA_900067245_01882 | Unannotated protein; Belongs to the ABC transporter superfamily. | Unannotated protein. | 0.905 |
CDL20_12620 | CDL25_00465 | GCA_900067245_02169 | GCA_900067245_00311 | Unannotated protein; Belongs to the ABC transporter superfamily. | Unannotated protein. | 0.767 |
CDL20_12620 | CDL27_04635 | GCA_900067245_02169 | GCA_900067245_00312 | Unannotated protein; Belongs to the ABC transporter superfamily. | Unannotated protein. | 0.623 |
CDL24_03850 | CDL20_12620 | GCA_900067245_01887 | GCA_900067245_02169 | Unannotated protein; Belongs to the ABC transporter superfamily. | Unannotated protein; Belongs to the ABC transporter superfamily. | 0.902 |
CDL24_03850 | CDL24_03875 | GCA_900067245_01887 | GCA_900067245_01882 | Unannotated protein; Belongs to the ABC transporter superfamily. | Unannotated protein. | 0.908 |
CDL24_03850 | CDL25_00465 | GCA_900067245_01887 | GCA_900067245_00311 | Unannotated protein; Belongs to the ABC transporter superfamily. | Unannotated protein. | 0.755 |
CDL24_03850 | CDL27_04635 | GCA_900067245_01887 | GCA_900067245_00312 | Unannotated protein; Belongs to the ABC transporter superfamily. | Unannotated protein. | 0.589 |
CDL24_03875 | CDL20_12620 | GCA_900067245_01882 | GCA_900067245_02169 | Unannotated protein. | Unannotated protein; Belongs to the ABC transporter superfamily. | 0.905 |
CDL24_03875 | CDL24_03850 | GCA_900067245_01882 | GCA_900067245_01887 | Unannotated protein. | Unannotated protein; Belongs to the ABC transporter superfamily. | 0.908 |
CDL24_03875 | CDL25_00465 | GCA_900067245_01882 | GCA_900067245_00311 | Unannotated protein. | Unannotated protein. | 0.804 |
CDL24_03875 | CDL27_04635 | GCA_900067245_01882 | GCA_900067245_00312 | Unannotated protein. | Unannotated protein. | 0.662 |
CDL25_00465 | CDL20_12620 | GCA_900067245_00311 | GCA_900067245_02169 | Unannotated protein. | Unannotated protein; Belongs to the ABC transporter superfamily. | 0.767 |
CDL25_00465 | CDL24_03850 | GCA_900067245_00311 | GCA_900067245_01887 | Unannotated protein. | Unannotated protein; Belongs to the ABC transporter superfamily. | 0.755 |
CDL25_00465 | CDL24_03875 | GCA_900067245_00311 | GCA_900067245_01882 | Unannotated protein. | Unannotated protein. | 0.804 |
CDL25_00465 | CDL25_13955 | GCA_900067245_00311 | GCA_900067245_01278 | Unannotated protein. | Unannotated protein. | 0.837 |
CDL25_00465 | CDL27_04635 | GCA_900067245_00311 | GCA_900067245_00312 | Unannotated protein. | Unannotated protein. | 0.994 |
CDL25_00465 | aroC | GCA_900067245_00311 | GCA_900067245_00309 | Unannotated protein. | Unannotated protein; Catalyzes the anti-1,4-elimination of the C-3 phosphate and the C-6 proR hydrogen from 5-enolpyruvylshikimate-3-phosphate (EPSP) to yield chorismate, which is the branch point compound that serves as the starting substrate for the three terminal pathways of aromatic amino acid biosynthesis. This reaction introduces a second double bond into the aromatic ring system. | 0.773 |
CDL25_00465 | potA | GCA_900067245_00311 | GCA_900067245_00310 | Unannotated protein. | Unannotated protein; Part of the ABC transporter complex PotABCD involved in spermidine/putrescine import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. Spermidine/putrescine importer (TC 3.A.1.11.1) family. | 0.993 |
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