Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
CDL18_08500 | CDL18_09815 | GCA_900067245_02467 | GCA_900067245_01023 | Unannotated protein. | Unannotated protein. | 0.584 |
CDL18_09815 | CDL18_08500 | GCA_900067245_01023 | GCA_900067245_02467 | Unannotated protein. | Unannotated protein. | 0.584 |
CDL18_09815 | CDL18_09825 | GCA_900067245_01023 | GCA_900067245_01025 | Unannotated protein. | Unannotated protein; Belongs to the Fur family. | 0.776 |
CDL18_09815 | CDL18_09830 | GCA_900067245_01023 | GCA_900067245_01026 | Unannotated protein. | Unannotated protein. | 0.747 |
CDL18_09815 | CDL18_09835 | GCA_900067245_01023 | GCA_900067245_01027 | Unannotated protein. | Unannotated protein; Could be a nuclease involved in processing of the 5'-end of pre-16S rRNA; Belongs to the YqgF HJR family. | 0.720 |
CDL18_09815 | CDL18_09840 | GCA_900067245_01023 | GCA_900067245_01028 | Unannotated protein. | Unannotated protein; Belongs to the UPF0297 family. | 0.681 |
CDL18_09815 | CDL18_09845 | GCA_900067245_01023 | GCA_900067245_01029 | Unannotated protein. | Unannotated protein. | 0.520 |
CDL18_09815 | CDL25_02660 | GCA_900067245_01023 | GCA_900067245_01022 | Unannotated protein. | Unannotated protein. | 0.962 |
CDL18_09815 | CDL27_00765 | GCA_900067245_01023 | GCA_900067245_03726 | Unannotated protein. | Unannotated protein. | 0.584 |
CDL18_09815 | GCA_900067245_03114 | GCA_900067245_01023 | GCA_900067245_03114 | Unannotated protein. | Unannotated protein. | 0.717 |
CDL18_09815 | rnj | GCA_900067245_01023 | GCA_900067245_01024 | Unannotated protein. | Unannotated protein; An RNase that has 5'-3' exonuclease and possibly endonuclease activity. Involved in maturation of rRNA and in some organisms also mRNA maturation and/or decay. | 0.840 |
CDL18_09825 | CDL18_09815 | GCA_900067245_01025 | GCA_900067245_01023 | Unannotated protein; Belongs to the Fur family. | Unannotated protein. | 0.776 |
CDL18_09825 | CDL18_09830 | GCA_900067245_01025 | GCA_900067245_01026 | Unannotated protein; Belongs to the Fur family. | Unannotated protein. | 0.703 |
CDL18_09825 | CDL18_09835 | GCA_900067245_01025 | GCA_900067245_01027 | Unannotated protein; Belongs to the Fur family. | Unannotated protein; Could be a nuclease involved in processing of the 5'-end of pre-16S rRNA; Belongs to the YqgF HJR family. | 0.705 |
CDL18_09825 | CDL18_09840 | GCA_900067245_01025 | GCA_900067245_01028 | Unannotated protein; Belongs to the Fur family. | Unannotated protein; Belongs to the UPF0297 family. | 0.718 |
CDL18_09825 | CDL18_09845 | GCA_900067245_01025 | GCA_900067245_01029 | Unannotated protein; Belongs to the Fur family. | Unannotated protein. | 0.454 |
CDL18_09825 | CDL25_02660 | GCA_900067245_01025 | GCA_900067245_01022 | Unannotated protein; Belongs to the Fur family. | Unannotated protein. | 0.723 |
CDL18_09825 | rnj | GCA_900067245_01025 | GCA_900067245_01024 | Unannotated protein; Belongs to the Fur family. | Unannotated protein; An RNase that has 5'-3' exonuclease and possibly endonuclease activity. Involved in maturation of rRNA and in some organisms also mRNA maturation and/or decay. | 0.776 |
CDL18_09830 | CDL18_09815 | GCA_900067245_01026 | GCA_900067245_01023 | Unannotated protein. | Unannotated protein. | 0.747 |
CDL18_09830 | CDL18_09825 | GCA_900067245_01026 | GCA_900067245_01025 | Unannotated protein. | Unannotated protein; Belongs to the Fur family. | 0.703 |
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