Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
CDL18_00595 | CDL27_07035 | GCA_900067245_00348 | GCA_900067245_01995 | Unannotated protein. | Unannotated protein; Belongs to the SUA5 family. | 0.605 |
CDL18_03995 | CDL20_13125 | GCA_900067245_01997 | GCA_900067245_01998 | Unannotated protein. | Unannotated protein. | 0.576 |
CDL18_03995 | CDL23_14190 | GCA_900067245_01997 | GCA_900067245_01994 | Unannotated protein. | Unannotated protein. | 0.742 |
CDL18_03995 | CDL27_07025 | GCA_900067245_01997 | GCA_900067245_01993 | Unannotated protein. | Unannotated protein. | 0.537 |
CDL18_03995 | CDL27_07035 | GCA_900067245_01997 | GCA_900067245_01995 | Unannotated protein. | Unannotated protein; Belongs to the SUA5 family. | 0.810 |
CDL18_03995 | glyA | GCA_900067245_01997 | GCA_900067245_00396 | Unannotated protein. | Unannotated protein; Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF-independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism. | 0.410 |
CDL18_03995 | upp | GCA_900067245_01997 | GCA_900067245_01996 | Unannotated protein. | Unannotated protein; Catalyzes the conversion of uracil and 5-phospho-alpha-D- ribose 1-diphosphate (PRPP) to UMP and diphosphate. | 0.841 |
CDL20_13125 | CDL18_03995 | GCA_900067245_01998 | GCA_900067245_01997 | Unannotated protein. | Unannotated protein. | 0.576 |
CDL20_13125 | CDL23_14190 | GCA_900067245_01998 | GCA_900067245_01994 | Unannotated protein. | Unannotated protein. | 0.550 |
CDL20_13125 | CDL27_07025 | GCA_900067245_01998 | GCA_900067245_01993 | Unannotated protein. | Unannotated protein. | 0.412 |
CDL20_13125 | CDL27_07035 | GCA_900067245_01998 | GCA_900067245_01995 | Unannotated protein. | Unannotated protein; Belongs to the SUA5 family. | 0.550 |
CDL20_13125 | upp | GCA_900067245_01998 | GCA_900067245_01996 | Unannotated protein. | Unannotated protein; Catalyzes the conversion of uracil and 5-phospho-alpha-D- ribose 1-diphosphate (PRPP) to UMP and diphosphate. | 0.550 |
CDL23_14190 | CDL18_03995 | GCA_900067245_01994 | GCA_900067245_01997 | Unannotated protein. | Unannotated protein. | 0.742 |
CDL23_14190 | CDL20_13125 | GCA_900067245_01994 | GCA_900067245_01998 | Unannotated protein. | Unannotated protein. | 0.550 |
CDL23_14190 | CDL27_07025 | GCA_900067245_01994 | GCA_900067245_01993 | Unannotated protein. | Unannotated protein. | 0.561 |
CDL23_14190 | CDL27_07035 | GCA_900067245_01994 | GCA_900067245_01995 | Unannotated protein. | Unannotated protein; Belongs to the SUA5 family. | 0.791 |
CDL23_14190 | upp | GCA_900067245_01994 | GCA_900067245_01996 | Unannotated protein. | Unannotated protein; Catalyzes the conversion of uracil and 5-phospho-alpha-D- ribose 1-diphosphate (PRPP) to UMP and diphosphate. | 0.774 |
CDL27_02930 | CDL27_07035 | GCA_900067245_03218 | GCA_900067245_01995 | Unannotated protein. | Unannotated protein; Belongs to the SUA5 family. | 0.547 |
CDL27_07025 | CDL18_03995 | GCA_900067245_01993 | GCA_900067245_01997 | Unannotated protein. | Unannotated protein. | 0.537 |
CDL27_07025 | CDL20_13125 | GCA_900067245_01993 | GCA_900067245_01998 | Unannotated protein. | Unannotated protein. | 0.412 |
page 1 of 3