STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_900067245_02034Unannotated protein. (266 aa)    
Predicted Functional Partners:
GCA_900067245_02035
Unannotated protein.
 
     0.948
GCA_900067245_02033
Unannotated protein.
 
     0.934
GCA_900067245_02039
Unannotated protein.
 
     0.836
CDL27_14545
Unannotated protein.
 
     0.821
GCA_900067245_02042
Unannotated protein.
 
     0.821
GCA_900067245_02027
Unannotated protein.
 
     0.811
GCA_900067245_00655
Unannotated protein.
 
     0.780
GCA_900067245_00658
Unannotated protein.
 
     0.778
CDL27_08165
Unannotated protein.
 
     0.777
CDL27_08150
Unannotated protein.
 
     0.776
Your Current Organism:
Ruminococcus gnavus
NCBI taxonomy Id: 33038
Other names: ATCC 29149, VPI C7-9, [. gnavus, [Ruminococcus] gnavus
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.