STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
hypAUnannotated protein; Involved in the maturation of [NiFe] hydrogenases. Required for nickel insertion into the metal center of the hydrogenase. (114 aa)    
Predicted Functional Partners:
hypB
Unannotated protein.
 
 
 0.987
GCA_900067245_02475
Unannotated protein.
 
     0.960
CDL27_06735
Unannotated protein.
 
  
 0.957
CDL27_06725
Unannotated protein.
 
     0.928
nifJ
Unannotated protein.
  
  
 0.749
CDL18_11460
Unannotated protein.
 
  
 0.547
CDL18_01000
Unannotated protein; Binds and transfers iron-sulfur (Fe-S) clusters to target apoproteins. Can hydrolyze ATP; Belongs to the Mrp/NBP35 ATP-binding proteins family.
   
   0.515
CDL27_03660
Unannotated protein.
   
   0.515
GCA_900067245_03090
Unannotated protein.
   
   0.515
Your Current Organism:
Ruminococcus gnavus
NCBI taxonomy Id: 33038
Other names: ATCC 29149, VPI C7-9, [. gnavus, [Ruminococcus] gnavus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.