Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
GCA_900067245_02560 | GCA_900067245_02561 | GCA_900067245_02560 | GCA_900067245_02561 | Unannotated protein. | Unannotated protein. | 0.773 |
GCA_900067245_02560 | accB | GCA_900067245_02560 | GCA_900067245_02568 | Unannotated protein. | Unannotated protein; This protein is a component of the acetyl coenzyme A carboxylase complex; first, biotin carboxylase catalyzes the carboxylation of the carrier protein and then the transcarboxylase transfers the carboxyl group to form malonyl-CoA. | 0.418 |
GCA_900067245_02560 | accC | GCA_900067245_02560 | GCA_900067245_02570 | Unannotated protein. | Unannotated protein; This protein is a component of the acetyl coenzyme A carboxylase complex; first, biotin carboxylase catalyzes the carboxylation of the carrier protein and then the transcarboxylase transfers the carboxyl group to form malonyl-CoA. | 0.404 |
GCA_900067245_02560 | acpP-2 | GCA_900067245_02560 | GCA_900067245_02563 | Unannotated protein. | Unannotated protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis. | 0.468 |
GCA_900067245_02560 | fabD | GCA_900067245_02560 | GCA_900067245_02565 | Unannotated protein. | Unannotated protein. | 0.444 |
GCA_900067245_02560 | fabF | GCA_900067245_02560 | GCA_900067245_02567 | Unannotated protein. | Unannotated protein; Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. | 0.426 |
GCA_900067245_02560 | fabG | GCA_900067245_02560 | GCA_900067245_02566 | Unannotated protein. | Unannotated protein; Catalyzes the NADPH-dependent reduction of beta-ketoacyl-ACP substrates to beta-hydroxyacyl-ACP products, the first reductive step in the elongation cycle of fatty acid biosynthesis. Belongs to the short-chain dehydrogenases/reductases (SDR) family. | 0.444 |
GCA_900067245_02560 | fabH | GCA_900067245_02560 | GCA_900067245_02562 | Unannotated protein. | Unannotated protein; Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched-chain and/or straight-chain of fatty acids; Belongs to the thiolase-like superfamily. FabH family. | 0.497 |
GCA_900067245_02560 | fabK | GCA_900067245_02560 | GCA_900067245_02564 | Unannotated protein. | Unannotated protein. | 0.444 |
GCA_900067245_02560 | fabZ | GCA_900067245_02560 | GCA_900067245_02569 | Unannotated protein. | Unannotated protein; Involved in unsaturated fatty acids biosynthesis. Catalyzes the dehydration of short chain beta-hydroxyacyl-ACPs and long chain saturated and unsaturated beta-hydroxyacyl-ACPs. | 0.404 |
GCA_900067245_02561 | GCA_900067245_02560 | GCA_900067245_02561 | GCA_900067245_02560 | Unannotated protein. | Unannotated protein. | 0.773 |
GCA_900067245_02561 | accB | GCA_900067245_02561 | GCA_900067245_02568 | Unannotated protein. | Unannotated protein; This protein is a component of the acetyl coenzyme A carboxylase complex; first, biotin carboxylase catalyzes the carboxylation of the carrier protein and then the transcarboxylase transfers the carboxyl group to form malonyl-CoA. | 0.418 |
GCA_900067245_02561 | accC | GCA_900067245_02561 | GCA_900067245_02570 | Unannotated protein. | Unannotated protein; This protein is a component of the acetyl coenzyme A carboxylase complex; first, biotin carboxylase catalyzes the carboxylation of the carrier protein and then the transcarboxylase transfers the carboxyl group to form malonyl-CoA. | 0.404 |
GCA_900067245_02561 | acpP-2 | GCA_900067245_02561 | GCA_900067245_02563 | Unannotated protein. | Unannotated protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis. | 0.468 |
GCA_900067245_02561 | fabD | GCA_900067245_02561 | GCA_900067245_02565 | Unannotated protein. | Unannotated protein. | 0.444 |
GCA_900067245_02561 | fabF | GCA_900067245_02561 | GCA_900067245_02567 | Unannotated protein. | Unannotated protein; Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. | 0.426 |
GCA_900067245_02561 | fabG | GCA_900067245_02561 | GCA_900067245_02566 | Unannotated protein. | Unannotated protein; Catalyzes the NADPH-dependent reduction of beta-ketoacyl-ACP substrates to beta-hydroxyacyl-ACP products, the first reductive step in the elongation cycle of fatty acid biosynthesis. Belongs to the short-chain dehydrogenases/reductases (SDR) family. | 0.444 |
GCA_900067245_02561 | fabH | GCA_900067245_02561 | GCA_900067245_02562 | Unannotated protein. | Unannotated protein; Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched-chain and/or straight-chain of fatty acids; Belongs to the thiolase-like superfamily. FabH family. | 0.497 |
GCA_900067245_02561 | fabK | GCA_900067245_02561 | GCA_900067245_02564 | Unannotated protein. | Unannotated protein. | 0.444 |
GCA_900067245_02561 | fabZ | GCA_900067245_02561 | GCA_900067245_02569 | Unannotated protein. | Unannotated protein; Involved in unsaturated fatty acids biosynthesis. Catalyzes the dehydration of short chain beta-hydroxyacyl-ACPs and long chain saturated and unsaturated beta-hydroxyacyl-ACPs. | 0.404 |
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