STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_900067245_02576Unannotated protein. (34 aa)    
Predicted Functional Partners:
GCA_900067245_02577
Unannotated protein.
       0.741
GCA_900067245_02578
Unannotated protein.
       0.707
GCA_900067245_02579
Unannotated protein.
       0.707
GCA_900067245_02580
Unannotated protein.
       0.678
CDL27_09805
Unannotated protein.
       0.678
glgP
Unannotated protein; Phosphorylase is an important allosteric enzyme in carbohydrate metabolism. Enzymes from different sources differ in their regulatory mechanisms and in their natural substrates. However, all known phosphorylases share catalytic and structural properties.
       0.600
malQ
Unannotated protein.
       0.526
CDL20_08180
Unannotated protein; Belongs to the glycosyl hydrolase 13 family.
       0.509
CDL27_09790
Unannotated protein.
       0.508
CDL25_04525
Unannotated protein.
       0.493
Your Current Organism:
Ruminococcus gnavus
NCBI taxonomy Id: 33038
Other names: ATCC 29149, VPI C7-9, [. gnavus, [Ruminococcus] gnavus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.