STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
cbiNUnannotated protein; Part of the energy-coupling factor (ECF) transporter complex CbiMNOQ involved in cobalt import; Belongs to the CbiN family. (104 aa)    
Predicted Functional Partners:
cbiM
Unannotated protein; Part of the energy-coupling factor (ECF) transporter complex CbiMNOQ involved in cobalt import.
 
 0.999
cbiQ
Unannotated protein.
 
 
 0.996
CDL25_07270
Unannotated protein; Part of an ABC transporter complex. Responsible for energy coupling to the transport system.
 
 
 0.991
cbiT
Unannotated protein.
  
  
 0.920
cbiD
Unannotated protein; Catalyzes the methylation of C-1 in cobalt-precorrin-5B to form cobalt-precorrin-6A.
 
  
 0.919
CDL25_07265
Unannotated protein.
  
  
 0.907
CobI
Unannotated protein; Belongs to the precorrin methyltransferase family.
 
  
 0.888
cobJ
Unannotated protein.
 
  
 0.849
cobM
Unannotated protein.
 
  
 0.846
cobA
Unannotated protein.
 
  
 0.834
Your Current Organism:
Ruminococcus gnavus
NCBI taxonomy Id: 33038
Other names: ATCC 29149, VPI C7-9, [. gnavus, [Ruminococcus] gnavus
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