STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CDL24_10265Unannotated protein. (113 aa)    
Predicted Functional Partners:
GCA_900067245_03071
Unannotated protein.
     0.846
GCA_900067245_00065
Unannotated protein.
  
     0.773
CDL20_09985
Unannotated protein.
  
     0.767
CDL23_04045
Unannotated protein.
  
     0.762
CDL18_07875
Unannotated protein.
  
     0.759
CDL18_08325
Unannotated protein.
  
     0.723
GCA_900067245_00053
Unannotated protein.
  
     0.718
GCA_900067245_00949
Unannotated protein.
  
     0.713
CDL24_13850
Unannotated protein.
  
     0.704
GCA_900067245_00061
Unannotated protein.
  
     0.690
Your Current Organism:
Ruminococcus gnavus
NCBI taxonomy Id: 33038
Other names: ATCC 29149, VPI C7-9, [. gnavus, [Ruminococcus] gnavus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.