STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_900067245_03077Unannotated protein. (362 aa)    
Predicted Functional Partners:
GCA_900067245_00634
Unannotated protein.
  
     0.723
GCA_900067245_01951
Unannotated protein.
  
     0.708
GCA_900067245_02397
Unannotated protein.
  
     0.541
GCA_900067245_02379
Unannotated protein.
 
  
 0.538
GCA_900067245_02027
Unannotated protein.
 
  
 0.518
GCA_900067245_00657
Unannotated protein.
  
     0.509
CDL27_16005
Unannotated protein.
  
     0.509
CDL27_01015
Unannotated protein.
  
     0.508
GCA_900067245_00666
Unannotated protein.
 
  
 0.507
CDL27_01020
Unannotated protein.
  
     0.485
Your Current Organism:
Ruminococcus gnavus
NCBI taxonomy Id: 33038
Other names: ATCC 29149, VPI C7-9, [. gnavus, [Ruminococcus] gnavus
Server load: low (28%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.