STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_900067245_03117Unannotated protein. (358 aa)    
Predicted Functional Partners:
GCA_900067245_03118
Unannotated protein.
 
   
 0.958
GCA_900067245_03119
Unannotated protein.
 
  
 0.955
GCA_900067245_03116
Unannotated protein.
 
   
 0.943
GCA_900067245_03112
Unannotated protein.
 
  
 0.850
GCA_900067245_03110
Unannotated protein.
 
     0.815
GCA_900067245_03111
Unannotated protein.
 
     0.771
GCA_900067245_03114
Unannotated protein.
 
   
 0.702
GCA_900067245_03120
Unannotated protein.
       0.539
GCA_900067245_03113
Unannotated protein.
 
  
 0.489
GCA_900067245_03115
Unannotated protein.
       0.471
Your Current Organism:
Ruminococcus gnavus
NCBI taxonomy Id: 33038
Other names: ATCC 29149, VPI C7-9, [. gnavus, [Ruminococcus] gnavus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.