Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
CDL18_07535 | CDL23_09750 | GCA_900067245_01135 | GCA_900067245_03254 | Unannotated protein; Involved in 1,2-propanediol (1,2-PD) degradation by catalyzing the conversion of propanoyl-CoA to propanoyl-phosphate. | Unannotated protein. | 0.800 |
CDL18_07535 | CDL27_04025 | GCA_900067245_01135 | GCA_900067245_02126 | Unannotated protein; Involved in 1,2-propanediol (1,2-PD) degradation by catalyzing the conversion of propanoyl-CoA to propanoyl-phosphate. | Unannotated protein; Belongs to the aldehyde dehydrogenase family. | 0.827 |
CDL18_07535 | CDL27_08385 | GCA_900067245_01135 | GCA_900067245_01141 | Unannotated protein; Involved in 1,2-propanediol (1,2-PD) degradation by catalyzing the conversion of propanoyl-CoA to propanoyl-phosphate. | Unannotated protein. | 0.976 |
CDL18_07535 | CDL27_08405 | GCA_900067245_01135 | GCA_900067245_01145 | Unannotated protein; Involved in 1,2-propanediol (1,2-PD) degradation by catalyzing the conversion of propanoyl-CoA to propanoyl-phosphate. | Unannotated protein. | 0.927 |
CDL18_07535 | GCA_900067245_02406 | GCA_900067245_01135 | GCA_900067245_02406 | Unannotated protein; Involved in 1,2-propanediol (1,2-PD) degradation by catalyzing the conversion of propanoyl-CoA to propanoyl-phosphate. | Unannotated protein. | 0.827 |
CDL18_07535 | pflB | GCA_900067245_01135 | GCA_900067245_01045 | Unannotated protein; Involved in 1,2-propanediol (1,2-PD) degradation by catalyzing the conversion of propanoyl-CoA to propanoyl-phosphate. | Unannotated protein. | 0.911 |
CDL18_07535 | pta | GCA_900067245_01135 | GCA_900067245_00229 | Unannotated protein; Involved in 1,2-propanediol (1,2-PD) degradation by catalyzing the conversion of propanoyl-CoA to propanoyl-phosphate. | Unannotated protein. | 0.914 |
CDL18_10390 | CDL23_09750 | GCA_900067245_03253 | GCA_900067245_03254 | Unannotated protein. | Unannotated protein. | 0.737 |
CDL18_10390 | pta | GCA_900067245_03253 | GCA_900067245_00229 | Unannotated protein. | Unannotated protein. | 0.478 |
CDL18_10390 | topB-2 | GCA_900067245_03253 | GCA_900067245_03252 | Unannotated protein. | Unannotated protein. | 0.801 |
CDL23_09750 | CDL18_07535 | GCA_900067245_03254 | GCA_900067245_01135 | Unannotated protein. | Unannotated protein; Involved in 1,2-propanediol (1,2-PD) degradation by catalyzing the conversion of propanoyl-CoA to propanoyl-phosphate. | 0.800 |
CDL23_09750 | CDL18_10390 | GCA_900067245_03254 | GCA_900067245_03253 | Unannotated protein. | Unannotated protein. | 0.737 |
CDL23_09750 | CDL27_04025 | GCA_900067245_03254 | GCA_900067245_02126 | Unannotated protein. | Unannotated protein; Belongs to the aldehyde dehydrogenase family. | 0.920 |
CDL23_09750 | CDL27_08385 | GCA_900067245_03254 | GCA_900067245_01141 | Unannotated protein. | Unannotated protein. | 0.840 |
CDL23_09750 | CDL27_08405 | GCA_900067245_03254 | GCA_900067245_01145 | Unannotated protein. | Unannotated protein. | 0.802 |
CDL23_09750 | GCA_900067245_01334 | GCA_900067245_03254 | GCA_900067245_01334 | Unannotated protein. | Unannotated protein. | 0.652 |
CDL23_09750 | GCA_900067245_02406 | GCA_900067245_03254 | GCA_900067245_02406 | Unannotated protein. | Unannotated protein. | 0.920 |
CDL23_09750 | pflB | GCA_900067245_03254 | GCA_900067245_01045 | Unannotated protein. | Unannotated protein. | 0.802 |
CDL23_09750 | pta | GCA_900067245_03254 | GCA_900067245_00229 | Unannotated protein. | Unannotated protein. | 0.803 |
CDL23_09750 | topB-2 | GCA_900067245_03254 | GCA_900067245_03252 | Unannotated protein. | Unannotated protein. | 0.691 |
page 1 of 4