STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
dinJ_1Unannotated protein. (85 aa)    
Predicted Functional Partners:
relE2
Unannotated protein.
 
 
   0.942
yafQ_3
Unannotated protein.
  
 
 0.910
dinJ_2
Unannotated protein.
  
     0.774
GCA_900005695_00198
Unannotated protein.
  
     0.774
GCA_900005695_00649
Unannotated protein.
  
     0.774
yafQ_2
Unannotated protein.
 
 
 0.703
GCA_900005695_00199
Unannotated protein.
 
 
 0.703
GCA_900005695_00650
Unannotated protein.
 
 
 0.703
GCA_900005695_00636
Unannotated protein.
  
 
 0.619
GCA_900005695_00529
Unannotated protein.
       0.489
Your Current Organism:
Bartonella doshiae
NCBI taxonomy Id: 33044
Other names: ATCC 700133, B. doshiae, CCUG 50770, CIP 107026, NCTC 12862, strain R18
Server load: low (14%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.