STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_900005695_01486Unannotated protein. (381 aa)    
Predicted Functional Partners:
GCA_900005695_01484
Unannotated protein.
 
 
 0.993
GCA_900005695_01485
Unannotated protein.
 
 
 0.992
GCA_900005695_01483
Unannotated protein.
 
 
 0.988
GCA_900005695_00170
Unannotated protein; Belongs to the binding-protein-dependent transport system permease family.
 
 
 0.987
livH
Unannotated protein; Belongs to the binding-protein-dependent transport system permease family.
 
 
 0.984
GCA_900005695_01482
Unannotated protein.
 
 
 0.980
lptB_1
Unannotated protein.
 
 
 0.978
livF
Unannotated protein.
 
 
 0.962
GCA_900005695_01489
Unannotated protein.
    
  0.501
GCA_900005695_00213
Unannotated protein.
   
 0.499
Your Current Organism:
Bartonella doshiae
NCBI taxonomy Id: 33044
Other names: ATCC 700133, B. doshiae, CCUG 50770, CIP 107026, NCTC 12862, strain R18
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.