STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OPB35219.1Membrane fusion protein, macrolide-specific efflux system; IMG locus_tag: Btaycd_007190; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family. (408 aa)    
Predicted Functional Partners:
macB
Macrolide transport system ATP-binding/permease protein; Non-canonical ABC transporter that contains transmembrane domains (TMD), which form a pore in the membrane, and an ATP-binding domain (NBD), which is responsible for energy generation. Confers resistance against macrolides.
 
 
 0.999
OPB35220.1
Efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family; IMG locus_tag: Btaycd_007200.
 
 0.978
OPB35111.1
Hydrophobic/amphiphilic exporter-1, HAE1 family; IMG locus_tag: Btaycd_008440; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family.
 
 0.944
OPB33660.1
Outer membrane protein; IMG locus_tag: Btaycd_013390.
  
 0.806
OPB35221.1
Exodeoxyribonuclease-3; IMG locus_tag: Btaycd_007210.
       0.606
lolD
Lipoprotein-releasing system ATP-binding protein; Part of the ABC transporter complex LolCDE involved in the translocation of lipoproteins, in an ATP-dependent manner. Belongs to the ABC transporter superfamily. Lipoprotein translocase (TC 3.A.1.125) family.
  
 
 0.603
OPB35112.1
RND family efflux transporter, MFP subunit; IMG locus_tag: Btaycd_008450; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
  
   
 0.545
OPB35222.1
Outer membrane lipoprotein-sorting protein; Participates in the translocation of lipoproteins from the inner membrane to the outer membrane. Only forms a complex with a lipoprotein if the residue after the N-terminal Cys is not an aspartate (The Asp acts as a targeting signal to indicate that the lipoprotein should stay in the inner membrane).
       0.539
OPB35098.1
Multidrug resistance efflux pump; IMG locus_tag: Btaycd_008490.
 
 
 0.506
OPB35126.1
Membrane fusion protein, multidrug efflux system; IMG locus_tag: Btaycd_008200.
 
 
 0.494
Your Current Organism:
Bartonella taylorii
NCBI taxonomy Id: 33046
Other names: B. taylorii, Bartonella sp. CCT14, Bartonella sp. CCT26, CCUG 50774, CIP 107028, NCTC 12861, strain M6
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