STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OPB33340.1Hypothetical protein; IMG locus_tag: Btaycd_013680. (176 aa)    
Predicted Functional Partners:
OPB33339.1
Hypothetical protein; IMG locus_tag: Btaycd_013670.
 
    
0.786
OPB33342.1
YqaJ-like recombinase domain-containing protein; IMG locus_tag: Btaycd_013700.
 
     0.690
OPB33341.1
ERF superfamily protein; IMG locus_tag: Btaycd_013690.
 
     0.658
lpxA
acyl-[acyl-carrier-protein]--UDP-N- acetylglucosamine O-acyltransferase; Involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell.
  
 0.633
OPB35452.1
Outer membrane autotransporter barrel domain-containing protein; IMG locus_tag: Btaycd_004610.
  
     0.580
OPB34954.1
Hypothetical protein; IMG locus_tag: Btaycd_009980; hypothetical protein YdaU, DUF1376 family.
  
     0.495
OPB35432.1
3,4-dihydroxy 2-butanone 4-phosphate synthase / GTP cyclohydrolase II; Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate.
   
 
 0.484
OPB35358.1
Putative protein involved in exopolysaccharide biosynthesis; IMG locus_tag: Btaycd_005730.
 
     0.477
OPB35388.1
Bartonella effector protein BepC; IMG locus_tag: Btaycd_005630.
  
     0.465
OPB34955.1
Twinkle protein; IMG locus_tag: Btaycd_009990.
 
     0.444
Your Current Organism:
Bartonella taylorii
NCBI taxonomy Id: 33046
Other names: B. taylorii, Bartonella sp. CCT14, Bartonella sp. CCT26, CCUG 50774, CIP 107028, NCTC 12861, strain M6
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.