STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ALH81256.1Disulfide bond formation protein DsbC; Derived by automated computational analysis using gene prediction method: Protein Homology. (289 aa)    
Predicted Functional Partners:
ALH81255.1
Conjugal transfer protein TraB; Derived by automated computational analysis using gene prediction method: Protein Homology.
     0.954
ALH81266.1
Conjugal transfer protein TraF; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.821
ALH79778.1
Conjugal transfer protein TraF; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.815
ALH81254.1
Conjugal transfer protein TraK; Derived by automated computational analysis using gene prediction method: Protein Homology.
      0.808
ALH79789.1
Conjugal transfer protein TraB; Derived by automated computational analysis using gene prediction method: Protein Homology.
     0.802
ALH81253.1
Conjugal transfer protein TraE; Derived by automated computational analysis using gene prediction method: Protein Homology.
      0.800
ALH81252.1
Conjugal transfer protein TraL; Derived by automated computational analysis using gene prediction method: Protein Homology.
      0.792
ALH81268.1
Conjugal transfer protein TraG; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.786
ALH81261.1
Conjugal transfer protein TraF; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.785
ALH79776.1
Conjugal transfer protein TraG; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.784
Your Current Organism:
Sphingopyxis macrogoltabida
NCBI taxonomy Id: 33050
Other names: ATCC 51380, CIP 104196, DSM 8826, IFO 15033, JCM 10192, LMG 17324, LMG:17324, NBRC 15033, S. macrogoltabida, Sphingomonas macrogolitabida, Sphingomonas macrogoltabidus, strain 203
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.