Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
SB4_00795Glucose-fructose oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology. (377 aa)    
Predicted Functional Partners:
SB4_08890
Gluconolactonase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.838
SB4_00790
Glycoside hydrolase family 15; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.548
SB4_00800
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.539
SB4_06805
Gluconolaconase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
  0.534
SB4_00785
Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.528
SB4_03280
Gluconolaconase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
  0.520
hisD
Histidinol dehydrogenase; Catalyzes the sequential NAD-dependent oxidations of L- histidinol to L-histidinaldehyde and then to L-histidine.
    
   0.507
SB4_04690
Antibiotic biosynthesis monooxygenase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
      0.506
SB4_09025
AP endonuclease; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.490
SB4_09000
Xylose isomerase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.467
Your Current Organism:
Sphingomonas sanguinis
NCBI taxonomy Id: 33051
Other names: 13937T, ATCC 51382, CIP 104197, DSM 13885, GIFU 2397, GIFU:2397, HAMBI 2010, IFO 13937, JCM 7514, LMG 17325, LMG:17325, NBRC 13937, S. sanguinis, Sphingomonas sanguis, strain 13937
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